Information for 20-CTTTCTCAGCTCC (Motif 43)

A T G C A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C T A G G T A C A C G T A C T G C G T A A C T G C G T A C G T A C G T A A T C G
p-value:1e-5
log p-value:-1.275e+01
Information Content per bp:1.934
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 30.8bp
Average Position of motif in Background45.2 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBR1/MA0802.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTTTCTCAGCTCC
-TTTCACACCT--
 A T G C A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C A G T C
A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTTTCTCAGCTCC
HTTTCCCASG---
 A T G C A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C A G T C
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTTTCTCAGCTCC
-ATTAACACCT--
 A T G C A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C A G T C
A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTTTCTCAGCTCC
AGTATTCTCGGTTGC
 A C G T A C G T A T G C A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C A G T C
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTTCTCAGCTCC
-ASTTTCACTTCC
 A T G C A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C A G T C
A C G T C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTTTCTCAGCTCC
-KTTCACACCT--
 A T G C A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C A G T C
A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTTTCTCAGCTCC
--TTMACACCTT-
 A T G C A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C A G T C
A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTTTCTCAGCTCC
NTTTTCACACCTT-
 A C G T A T G C A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C A G T C
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTTTCTCAGCTCC-
--GTTTCACTTCCG
 A T G C A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C A G T C A C G T
A C G T A C G T A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.57
Offset:8
Orientation:forward strand
Alignment:CTTTCTCAGCTCC-
--------GCTCCG
 A T G C A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G