Information for 15-SGGCTGCAWATMAWKC (Motif 23)

A T C G A C T G A C T G A G T C A C G T A C T G A G T C C G T A C G T A C T G A C G A T G T A C C G T A C G A T C A G T A G T C
Reverse Opposite:
A C T G G T A C C G T A A C G T C A T G C G T A A G C T C G A T A C G T A C T G A G T C C G T A A C T G A G T C A G T C A T G C
p-value:1e-8
log p-value:-2.055e+01
Information Content per bp:1.858
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.4 +/- 25.6bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.55
Offset:1
Orientation:forward strand
Alignment:SGGCTGCAWATMAWKC
-GSCTGTCACTCA---
 A T C G A C T G A C T G A G T C A C G T A C T G A G T C C G T A C G T A C T G A C G A T G T A C C G T A C G A T C A G T A G T C
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:SGGCTGCAWATMAWKC
-ATATGCAAATNNN--
 A T C G A C T G A C T G A G T C A C G T A C T G A G T C C G T A C G T A C T G A C G A T G T A C C G T A C G A T C A G T A G T C
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-SGGCTGCAWATMAWKC
TTGTATGCAAATTAGA-
 A C G T A T C G A C T G A C T G A G T C A C G T A C T G A G T C C G T A C G T A C T G A C G A T G T A C C G T A C G A T C A G T A G T C
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-SGGCTGCAWATMAWKC
TTGTATGCAAATTAGA-
 A C G T A T C G A C T G A C T G A G T C A C G T A C T G A G T C C G T A C G T A C T G A C G A T G T A C C G T A C G A T C A G T A G T C
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:SGGCTGCAWATMAWKC
-NGCTN----------
 A T C G A C T G A C T G A G T C A C G T A C T G A G T C C G T A C G T A C T G A C G A T G T A C C G T A C G A T C A G T A G T C
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-SGGCTGCAWATMAWKC
TTGTATGCAAATTAGA-
 A C G T A T C G A C T G A C T G A G T C A C G T A C T G A G T C C G T A C G T A C T G A C G A T G T A C C G T A C G A T C A G T A G T C
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:SGGCTGCAWATMAWKC
--WATGCAAATGAG--
 A T C G A C T G A C T G A G T C A C G T A C T G A G T C C G T A C G T A C T G A C G A T G T A C C G T A C G A T C A G T A G T C
A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:SGGCTGCAWATMAWKC
-GGCCATAAATCA---
 A T C G A C T G A C T G A G T C A C G T A C T G A G T C C G T A C G T A C T G A C G A T G T A C C G T A C G A T C A G T A G T C
A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:SGGCTGCAWATMAWKC
--NCTGTCAATCAN--
 A T C G A C T G A C T G A G T C A C G T A C T G A G T C C G T A C G T A C T G A C G A T G T A C C G T A C G A T C A G T A G T C
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:SGGCTGCAWATMAWKC
--SCTGTCAVTCAV--
 A T C G A C T G A C T G A G T C A C G T A C T G A G T C C G T A C G T A C T G A C G A T G T A C C G T A C G A T C A G T A G T C
A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T