Information for 13-KCGCAGCAATTGCTGM (Motif 21)

A C G T A T G C C A T G A T G C C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A T C G G T A C
Reverse Opposite:
A C G T A T G C C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C T G T A G C A C G T A T C G G A T C A T C G G T A C
p-value:1e-8
log p-value:-2.055e+01
Information Content per bp:1.830
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets20.3 +/- 9.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0007.1_Barx1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:KCGCAGCAATTGCTGM--
--AAAGTAATTAGTGAAT
 A C G T A T G C C A T G A T G C C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A T C G G T A C A C G T A C G T
A C G T A C G T G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T

PH0024.1_Dlx5/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:KCGCAGCAATTGCTGM
NANNGNTAATTACCNN
 A C G T A T G C C A T G A T G C C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A T C G G T A C
A T G C T C G A A C T G T G C A T C A G A T G C G A C T G T C A C G T A G A C T C A G T C T G A A G T C A G T C A T G C T A G C

Hmx1/MA0896.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:KCGCAGCAATTGCTGM-
ANNCATTAATTGCTNGN
 A C G T A T G C C A T G A T G C C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A T C G G T A C A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:KCGCAGCAATTGCTGM-
ANNCATTAATTGCTNGN
 A C G T A T G C C A T G A T G C C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A T C G G T A C A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0109.1_Nkx1-1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:KCGCAGCAATTGCTGM-
NCCCACTAATTAGCGCA
 A C G T A T G C C A T G A T G C C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A T C G G T A C A C G T
A G C T G T A C A T G C G A T C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G T C A C T G A T G C G C T A

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:KCGCAGCAATTGCTGM-----
------AAANTGCTGACTNAG
 A C G T A T G C C A T G A T G C C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A T C G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:KCGCAGCAATTGCTGM----
---AATCAATTGTTCCGCTA
 A C G T A T G C C A T G A T G C C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A T C G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

MAFF/MA0495.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:KCGCAGCAATTGCTGM------
----NAAAANTGCTGACTCAGC
 A C G T A T G C C A T G A T G C C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C

PH0008.1_Barx2/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:KCGCAGCAATTGCTGM
NANAANTAATTANTTA
 A C G T A T G C C A T G A T G C C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A T C G G T A C
G A C T C T G A G A C T G T C A T C G A A G T C G A C T G T C A G C T A C A G T C A G T C T G A T G A C A G C T C G A T C G T A

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.60
Offset:6
Orientation:forward strand
Alignment:KCGCAGCAATTGCTGM-
------AATTTGCTGAC
 A C G T A T G C C A T G A T G C C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A T C G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C