Information for 9-TTGAATGTCTCTC (Motif 20)

A G C T A C G T A C T G C G T A C G T A A G C T A C T G G A C T A G T C A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A A C T G C T G A A G T C C T G A A C G T A C G T A G T C C G T A C T G A
p-value:1e-8
log p-value:-2.055e+01
Information Content per bp:1.939
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 28.3bp
Average Position of motif in Background33.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TTGAATGTCTCTC
NNTNTCATGAATGT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G C G T A C G T A A G C T A C T G G A C T A G T C A C G T A G T C A C G T A G T C
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTGAATGTCTCTC
NTGGAATGTN----
 A C G T A G C T A C G T A C T G C G T A C G T A A G C T A C T G G A C T A G T C A C G T A G T C A C G T A G T C
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTGAATGTCTCTC
CTTGAGTGGCT---
 A C G T A G C T A C G T A C T G C G T A C G T A A G C T A C T G G A C T A G T C A C G T A G T C A C G T A G T C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTGAATGTCTCTC
ACTATGAATGAATGAT
 A C G T A C G T A C G T A G C T A C G T A C T G C G T A C G T A A G C T A C T G G A C T A G T C A C G T A G T C A C G T A G T C
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

TEAD3/MA0808.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTGAATGTCTCTC
TGGAATGT-----
 A G C T A C G T A C T G C G T A C G T A A G C T A C T G G A C T A G T C A C G T A G T C A C G T A G T C
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TTGAATGTCTCTC
ATTTGAATT------
 A C G T A C G T A G C T A C G T A C T G C G T A C G T A A G C T A C T G G A C T A G T C A C G T A G T C A C G T A G T C
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TTGAATGTCTCTC----
-----TGTCTGDCACCT
 A G C T A C G T A C T G C G T A C G T A A G C T A C T G G A C T A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TTGAATGTCTCTC----
----CTGTCTGTCACCT
 A G C T A C G T A C T G C G T A C G T A A G C T A C T G G A C T A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

TEAD1/MA0090.2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTGAATGTCTCTC
NTGGAATGTG----
 A C G T A G C T A C G T A C T G C G T A C G T A A G C T A C T G G A C T A G T C A C G T A G T C A C G T A G T C
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTGAATGTCTCTC
TTGATTGN-----
 A G C T A C G T A C T G C G T A C G T A A G C T A C T G G A C T A G T C A C G T A G T C A C G T A G T C
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T