Information for 12-WSWGMCTKCTGWCCTC (Motif 16)

C G T A A T C G C G A T A C T G G T C A G T A C A C G T A C T G A G T C A C G T A C T G C G T A A G T C G T A C C G A T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C T G C G A T A G T C C G T A A C T G G T A C C G T A A C T G A C G T A G T C C G T A A T G C C G A T
p-value:1e-10
log p-value:-2.305e+01
Information Content per bp:1.848
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 24.5bp
Average Position of motif in Background37.7 +/- 3.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:WSWGMCTKCTGWCCTC
--TGACCTTTGACCTC
 C G T A A T C G C G A T A C T G G T C A G T A C A C G T A C T G A G T C A C G T A C T G C G T A A G T C G T A C C G A T A G T C
A C G T A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

NR2C2/MA0504.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:WSWGMCTKCTGWCCTC-
--TGACCTCTGACCCCN
 C G T A A T C G C G A T A C T G G T C A G T A C A C G T A C T G A G T C A C G T A C T G C G T A A G T C G T A C C G A T A G T C A C G T
A C G T A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.67
Offset:9
Orientation:reverse strand
Alignment:WSWGMCTKCTGWCCTC-
---------TGACCTYA
 C G T A A T C G C G A T A C T G G T C A G T A C A C G T A C T G A G T C A C G T A C T G C G T A A G T C G T A C C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:WSWGMCTKCTGWCCTC--
-----CNNTTGACCTTTG
 C G T A A T C G C G A T A C T G G T C A G T A C A C G T A C T G A G T C A C G T A C T G C G T A A G T C G T A C C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.64
Offset:9
Orientation:reverse strand
Alignment:WSWGMCTKCTGWCCTC-
---------TGACCYCT
 C G T A A T C G C G A T A C T G G T C A G T A C A C G T A C T G A G T C A C G T A C T G C G T A A G T C G T A C C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.61
Offset:9
Orientation:reverse strand
Alignment:WSWGMCTKCTGWCCTC
---------TGACCT-
 C G T A A T C G C G A T A C T G G T C A G T A C A C G T A C T G A G T C A C G T A C T G C G T A A G T C G T A C C G A T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:WSWGMCTKCTGWCCTC
--TGACCTTTGACCTN
 C G T A A T C G C G A T A C T G G T C A G T A C A C G T A C T G A G T C A C G T A C T G C G T A A G T C G T A C C G A T A G T C
A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:WSWGMCTKCTGWCCTC--
--------CTGACCTTTG
 C G T A A T C G C G A T A C T G G T C A G T A C A C G T A C T G A G T C A C G T A C T G C G T A A G T C G T A C C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Rxra/MA0512.2/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:WSWGMCTKCTGWCCTC
--TGACCTTTGACCCC
 C G T A A T C G C G A T A C T G G T C A G T A C A C G T A C T G A G T C A C G T A C T G C G T A A G T C G T A C C G A T A G T C
A C G T A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

RXRG/MA0856.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:WSWGMCTKCTGWCCTC
--TGACCTTTGACCCC
 C G T A A T C G C G A T A C T G G T C A G T A C A C G T A C T G A G T C A C G T A C T G C G T A A G T C G T A C C G A T A G T C
A C G T A C G T A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C