Information for 1-TTTGCAAGCC (Motif 14)

A G C T C G A T A G C T T C A G A T G C G C T A G T C A A T C G A G T C G T A C
Reverse Opposite:
C A T G A C T G A T G C A C G T C G A T A T C G A G T C C T G A C G T A C T G A
p-value:1e-10
log p-value:-2.359e+01
Information Content per bp:1.832
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif94.6
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets44.3 +/- 30.1bp
Average Position of motif in Background53.5 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCAAGCC
ANATTTTTGCAANTN
 A C G T A C G T A C G T A C G T A C G T A G C T C G A T A G C T T C A G A T G C G C T A G T C A A T C G A G T C G T A C
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTGCAAGCC
TTTGAAACCG
 A G C T C G A T A G C T T C A G A T G C G C T A G T C A A T C G A G T C G T A C
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTGCAAGCC
NTTTTACGAGN-
 A C G T A C G T A G C T C G A T A G C T T C A G A T G C G C T A G T C A A T C G A G T C G T A C
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTGCAAGCC
NNTTGGCANN--
 A C G T A C G T A G C T C G A T A G C T T C A G A T G C G C T A G T C A A T C G A G T C G T A C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TTTGCAAGCC
TTCATTTGCATAT-
 A C G T A C G T A C G T A C G T A G C T C G A T A G C T T C A G A T G C G C T A G T C A A T C G A G T C G T A C
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTTGCAAGCC-
AGATGCAATCCC
 A C G T A G C T C G A T A G C T T C A G A T G C G C T A G T C A A T C G A G T C G T A C A C G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

CEBPA/MA0102.3/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTTGCAAGCC
NATTGTGCAAT--
 A C G T A C G T A C G T A G C T C G A T A G C T T C A G A T G C G C T A G T C A A T C G A G T C G T A C
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTTGCAAGCC----
ACTATGCCAACCTACC
 A C G T A C G T A G C T C G A T A G C T T C A G A T G C G C T A G T C A A T C G A G T C G T A C A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTTGCAAGCC-
-TBGCACGCAA
 A G C T C G A T A G C T T C A G A T G C G C T A G T C A A T C G A G T C G T A C A C G T
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

PH0048.1_Hoxa13/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTTGCAAGCC--
ANATTTTACGAGNNNN
 A C G T A C G T A C G T A C G T A G C T C G A T A G C T T C A G A T G C G C T A G T C A A T C G A G T C G T A C A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T