Information for 3-TCTGGSTMTSTGG (Motif 13)

A C G T A G T C A G C T A C T G A C T G A T G C A C G T T G A C A C G T A T C G A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A T G C C G T A A C T G C G T A T A C G A G T C A G T C C T G A A C T G C G T A
p-value:1e-10
log p-value:-2.370e+01
Information Content per bp:1.887
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif34.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets49.1 +/- 26.0bp
Average Position of motif in Background55.6 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCTGGSTMTSTGG
GGTCTGGCAT-----
 A C G T A C G T A C G T A G T C A G C T A C T G A C T G A T G C A C G T T G A C A C G T A T C G A C G T A C T G A C T G
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------TCTGGSTMTSTGG
NNTNNTGTCTGGNNTNG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C T G A C T G A T G C A C G T T G A C A C G T A T C G A C G T A C T G A C T G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TCTGGSTMTSTGG---
-----GTCTGTGGTTT
 A C G T A G T C A G C T A C T G A C T G A T G C A C G T T G A C A C G T A T C G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TCTGGSTMTSTGG----
-----NNHTGTGGTTWN
 A C G T A G T C A G C T A C T G A C T G A T G C A C G T T G A C A C G T A T C G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TCTGGSTMTSTGG
VBSYGTCTGG--------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C T G A C T G A T G C A C G T T G A C A C G T A T C G A C G T A C T G A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCTGGSTMTSTGG
CTGTCTGG--------
 A C G T A C G T A C G T A C G T A G T C A G C T A C T G A C T G A T G C A C G T T G A C A C G T A T C G A C G T A C T G A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TCTGGSTMTSTGG---
------GCTGTGGTTT
 A C G T A G T C A G C T A C T G A C T G A T G C A C G T T G A C A C G T A T C G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TCTGGSTMTSTGG----
-GTAGGTCACTGGGTCA
 A C G T A G T C A G C T A C T G A C T G A T G C A C G T T G A C A C G T A T C G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TCTGGSTMTSTGG---
------NNTGTGGTTT
 A C G T A G T C A G C T A C T G A C T G A T G C A C G T T G A C A C G T A T C G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:TCTGGSTMTSTGG----
-------CTGTGGTTTN
 A C G T A G T C A G C T A C T G A C T G A T G C A C G T T G A C A C G T A T C G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G