Information for 10-GTGCTGCCTATGDCCT (Motif 11)

C T A G A C G T A C T G G T A C A C G T A C T G A G T C A G T C C G A T C G T A A C G T A T C G C G T A A T G C A T G C A C G T
Reverse Opposite:
C G T A A T C G A T C G G C A T A T G C G T C A C G A T C G T A A C T G A C T G A G T C C G T A C A T G A G T C C G T A A G T C
p-value:1e-10
log p-value:-2.436e+01
Information Content per bp:1.855
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.7 +/- 14.2bp
Average Position of motif in Background36.9 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GTGCTGCCTATGDCCT
----TGACCTTGACCT
 C T A G A C G T A C T G G T A C A C G T A C T G A G T C A G T C C G A T C G T A A C G T A T C G C G T A A T G C A T G C A C G T
A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTGCTGCCTATGDCCT
--GGTGCCAAGT----
 C T A G A C G T A C T G G T A C A C G T A C T G A G T C A G T C C G A T C G T A A C G T A T C G C G T A A T G C A T G C A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTGCTGCCTATGDCCT-
---NTGCCCTTGGGCGN
 C T A G A C G T A C T G G T A C A C G T A C T G A G T C A G T C C G A T C G T A A C G T A T C G C G T A A T G C A T G C A C G T A C G T
A C G T A C G T A C G T G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

PB0041.1_Mafb_1/Jaspar

Match Rank:4
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GTGCTGCCTATGDCCT
AAATTTGCTGACTTAGA---
 A C G T A C G T A C G T A C G T C T A G A C G T A C T G G T A C A C G T A C T G A G T C A G T C C G A T C G T A A C G T A T C G C G T A A T G C A T G C A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GTGCTGCCTATGDCCT
----TGCCAA------
 C T A G A C G T A C T G G T A C A C G T A C T G A G T C A G T C C G A T C G T A A C G T A T C G C G T A A T G C A T G C A C G T
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTGCTGCCTATGDCCT
--CGTGCCAAG-----
 C T A G A C G T A C T G G T A C A C G T A C T G A G T C A G T C C G A T C G T A A C G T A T C G C G T A A T G C A T G C A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GTGCTGCCTATGDCCT
----AGCCAATCGG--
 C T A G A C G T A C T G G T A C A C G T A C T G A G T C A G T C C G A T C G T A A C G T A T C G C G T A A T G C A T G C A C G T
A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GTGCTGCCTATGDCCT
AAANTGCTGACTNAG----
 A C G T A C G T A C G T C T A G A C G T A C T G G T A C A C G T A C T G A G T C A G T C C G A T C G T A A C G T A T C G C G T A A T G C A T G C A C G T
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GTGCTGCCTATGDCCT---
------CNNTTGACCTTTG
 C T A G A C G T A C T G G T A C A C G T A C T G A G T C A G T C C G A T C G T A A C G T A T C G C G T A A T G C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:GTGCTGCCTATGDCCT--
----------TGACCTYA
 C T A G A C G T A C T G G T A C A C G T A C T G A G T C A G T C C G A T C G T A A C G T A T C G C G T A A T G C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A