Information for 9-GHAATDCAGTCDGTCA (Motif 10)

A C T G G C T A C G T A G C T A A C G T C A G T A T G C C G T A A C T G A C G T A T G C C G T A C T A G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G G T C A A G T C G A C T A T C G C G T A A G T C A C G T A T C G G T C A G T C A C G A T A C G T C G A T G T A C
p-value:1e-10
log p-value:-2.436e+01
Information Content per bp:1.767
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.2 +/- 22.7bp
Average Position of motif in Background62.1 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GHAATDCAGTCDGTCA
GTAGGTCACTGGGTCA
 A C T G G C T A C G T A G C T A A C G T C A G T A T G C C G T A A C T G A C G T A T G C C G T A C T A G A C G T A G T C C G T A
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GHAATDCAGTCDGTCA---
-------TGTCTGDCACCT
 A C T G G C T A C G T A G C T A A C G T C A G T A T G C C G T A A C T G A C G T A T G C C G T A C T A G A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GHAATDCAGTCDGTCA-
-----NCTGTCAATCAN
 A C T G G C T A C G T A G C T A A C G T C A G T A T G C C G T A A C T G A C G T A T G C C G T A C T A G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GHAATDCAGTCDGTCA-
-----SCTGTCAVTCAV
 A C T G G C T A C G T A G C T A A C G T C A G T A T G C C G T A A C T G A C G T A T G C C G T A C T A G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GHAATDCAGTCDGTCA---
------CTGTCTGTCACCT
 A C T G G C T A C G T A G C T A A C G T C A G T A T G C C G T A A C T G A C G T A T G C C G T A C T A G A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GHAATDCAGTCDGTCA
----GSCTGTCACTCA
 A C T G G C T A C G T A G C T A A C G T C A G T A T G C C G T A A C T G A C G T A T G C C G T A C T A G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

FOS::JUN/MA0099.2/Jaspar

Match Rank:7
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:GHAATDCAGTCDGTCA
---------TGAGTCA
 A C T G G C T A C G T A G C T A A C G T C A G T A T G C C G T A A C T G A C G T A T G C C G T A C T A G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A

PB0169.1_Sox15_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GHAATDCAGTCDGTCA
TNGAATTTCATTNAN---
 A C G T A C G T A C T G G C T A C G T A G C T A A C G T C A G T A T G C C G T A A C T G A C G T A T G C C G T A C T A G A C G T A G T C C G T A
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A A C G T A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GHAATDCAGTCDGTCA--
-------GGTGACTCATG
 A C T G G C T A C G T A G C T A A C G T C A G T A T G C C G T A A C T G A C G T A T G C C G T A C T A G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GHAATDCAGTCDGTCA
NNNANTGCAGTGCNNTT
 A C G T A C T G G C T A C G T A G C T A A C G T C A G T A T G C C G T A A C T G A C G T A T G C C G T A C T A G A C G T A G T C C G T A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T