Information for 4-CAAGGVTCAGAACCAC (Motif 8)

A G T C G T C A C T G A A C T G C T A G T C A G A C G T A G T C C G T A C T A G G T C A G T C A A G T C A G T C C G T A A G T C
Reverse Opposite:
A C T G C G A T A C T G A C T G A C G T A C G T A G T C A C G T A C T G G T C A A G T C A G T C G T A C A G C T A C G T A C T G
p-value:1e-11
log p-value:-2.684e+01
Information Content per bp:1.827
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.8 +/- 16.3bp
Average Position of motif in Background35.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAAGGVTCAGAACCAC
CAAAGGTCAG------
 A G T C G T C A C T G A A C T G C T A G T C A G A C G T A G T C C G T A C T A G G T C A G T C A A G T C A G T C C G T A A G T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.56
Offset:9
Orientation:forward strand
Alignment:CAAGGVTCAGAACCAC---
---------AAACCACANN
 A G T C G T C A C T G A A C T G C T A G T C A G A C G T A G T C C G T A C T A G G T C A G T C A A G T C A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.55
Offset:8
Orientation:forward strand
Alignment:CAAGGVTCAGAACCAC----
--------NWAACCACADNN
 A G T C G T C A C T G A A C T G C T A G T C A G A C G T A G T C C G T A C T A G G T C A G T C A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CAAGGVTCAGAACCAC
CTCCAGGGGTCAATTGA--
 A C G T A C G T A C G T A G T C G T C A C T G A A C T G C T A G T C A G A C G T A G T C C G T A C T A G G T C A G T C A A G T C A G T C C G T A A G T C
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:CAAGGVTCAGAACCAC---
---------AAACCACAGC
 A G T C G T C A C T G A A C T G C T A G T C A G A C G T A G T C C G T A C T A G G T C A G T C A A G T C A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CAAGGVTCAGAACCAC
GGCGAGGGGTCAAGGGC--
 A C G T A C G T A C G T A G T C G T C A C T G A A C T G C T A G T C A G A C G T A G T C C G T A C T A G G T C A G T C A A G T C A G T C C G T A A G T C
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.53
Offset:8
Orientation:forward strand
Alignment:CAAGGVTCAGAACCAC--
--------NAAACCACAG
 A G T C G T C A C T G A A C T G C T A G T C A G A C G T A G T C C G T A C T A G G T C A G T C A A G T C A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CAAGGVTCAGAACCAC----
AADGAGVCANYASTACAGNC
 A G T C G T C A C T G A A C T G C T A G T C A G A C G T A G T C C G T A C T A G G T C A G T C A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAAGGVTCAGAACCAC
-AGRGGTCA-------
 A G T C G T C A C T G A A C T G C T A G T C A G A C G T A G T C C G T A C T A G G T C A G T C A A G T C A G T C C G T A A G T C
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:CAAGGVTCAGAACCAC----
---------AAACCACAGAN
 A G T C G T C A C T G A A C T G C T A G T C A G A C G T A G T C C G T A C T A G G T C A G T C A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C