Information for 3-GGGCCAAGTG (Motif 4)

A C T G A C T G C T A G G A T C G T A C C G T A C G T A C T A G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G A T A C G T A C T G C T A G A G T C G T A C A G T C
p-value:1e-11
log p-value:-2.722e+01
Information Content per bp:1.889
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif3.08%
Number of Background Sequences with motif131.2
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets52.5 +/- 25.1bp
Average Position of motif in Background52.5 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GGGCCAAGTG--
--NTCAAGTGGN
 A C T G A C T G C T A G G A T C G T A C C G T A C G T A C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GGGCCAAGTG--
--KCCACGTGAC
 A C T G A C T G C T A G G A T C G T A C C G T A C G T A C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGGCCAAGTG-
-GGTCACGTGA
 A C T G A C T G C T A G G A T C G T A C C G T A C G T A C T A G A C G T A C T G A C G T
A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

Creb3l2/MA0608.1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGGCCAAGTG-
--GCCACGTGT
 A C T G A C T G C T A G G A T C G T A C C G T A C G T A C T A G A C G T A C T G A C G T
A C G T A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T

Mycn/MA0104.3/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGGCCAAGTG
--GCCACGTG
 A C T G A C T G C T A G G A T C G T A C C G T A C G T A C T A G A C G T A C T G
A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G

E-box(bHLH)/Promoter/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGGCCAAGTG-
CCGGTCACGTGA
 A C G T A C T G A C T G C T A G G A T C G T A C C G T A C G T A C T A G A C G T A C T G A C G T
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

Myc/MA0147.2/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GGGCCAAGTG---
---CCATGTGCTT
 A C T G A C T G C T A G G A T C G T A C C G T A C G T A C T A G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGGCCAAGTG-
-NNCCACGTGG
 A C T G A C T G C T A G G A T C G T A C C G T A C G T A C T A G A C G T A C T G A C G T
A C G T T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGGCCAAGTG-
-NNCCACGTGG
 A C T G A C T G C T A G G A T C G T A C C G T A C G T A C T A G A C G T A C T G A C G T
A C G T T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGGCCAAGTG-
--NTCAAGTGG
 A C T G A C T G C T A G G A T C G T A C C G T A C G T A C T A G A C G T A C T G A C G T
A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G