Information for 15-GAGATCACAA (Motif 29)

A C T G C G T A A C T G C G T A A C G T A G T C C G T A G T A C C G T A C G T A
Reverse Opposite:
A C G T C G A T A C T G A C G T A C T G C G T A A C G T A G T C A C G T A G T C
p-value:1e-2
log p-value:-4.797e+00
Information Content per bp:1.949
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.7 +/- 25.7bp
Average Position of motif in Background40.0 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GAGATCACAA
AAGGTCAC--
 A C T G C G T A A C T G C G T A A C G T A G T C C G T A G T A C C G T A C G T A
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAGATCACAA
-AGATAASR-
 A C T G C G T A A C T G C G T A A C G T A G T C C G T A G T A C C G T A C G T A
A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T

GATA2/MA0036.2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAGATCACAA---
NCAGATAAGAANNN
 A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A G T A C C G T A C G T A A C G T A C G T A C G T
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

LEF1/MA0768.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAGATCACAA----
AAAGATCAAAGGGTT
 A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A G T A C C G T A C G T A A C G T A C G T A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAGATCACAA
AGRGGTCA---
 A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A G T A C C G T A C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GAGATCACAA--
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A G T A C C G T A C G T A A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Tcf7/MA0769.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAGATCACAA-
AAAGATCAAAGG
 A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A G T A C C G T A C G T A A C G T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

PB0021.1_Gata3_1/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GAGATCACAA------
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A G T A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAGATCACAA
TRAGGTCA---
 A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A G T A C C G T A C G T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAGATCACAA
-AGATAAGA-
 A C T G C G T A A C T G C G T A A C G T A G T C C G T A G T A C C G T A C G T A
A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T