Information for 18-TGTCCTTGGTGTTCAT (Motif 28)

A C G T A C T G C G A T A G T C A G T C A G C T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A G T C C G T A A G C T
Reverse Opposite:
C T G A A C G T A C T G C G T A C G T A A G T C C G T A A G T C G T A C C G T A C T G A A C T G C T A G C G T A A G T C C G T A
p-value:1e-4
log p-value:-9.512e+00
Information Content per bp:1.895
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.6 +/- 32.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TGTCCTTGGTGTTCAT
GGAGCTGTCCATGGTGCTGA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A G T C A G T C A G C T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A G T C C G T A A G C T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A A C G T

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCCTTGGTGTTCAT
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A G T C A G T C A G C T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A G T C C G T A A G C T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

Vdr/MA0693.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGTCCTTGGTGTTCAT
GAGTTCATTGAGTTCA-
 A C G T A C G T A C T G C G A T A G T C A G T C A G C T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A G T C C G T A A G C T
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCTTGGTGTTCAT
CTGTTCCTGG-------
 A C G T A C G T A C T G C G A T A G T C A G T C A G C T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A G T C C G T A A G C T
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCTTGGTGTTCAT
CTGACCTTTG-------
 A C G T A C G T A C T G C G A T A G T C A G T C A G C T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A G T C C G T A A G C T
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCTTGGTGTTCAT
BNTGDCCTTG--------
 A C G T A C G T A C G T A C T G C G A T A G T C A G T C A G C T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A G T C C G T A A G C T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:7
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:TGTCCTTGGTGTTCAT
---------TGTTTAC
 A C G T A C T G C G A T A G T C A G T C A G C T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A G T C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGTCCTTGGTGTTCAT
TGACCTTGAV------
 A C G T A C T G C G A T A G T C A G T C A G C T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A G T C C G T A A G C T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

FOXO4/MA0848.1/Jaspar

Match Rank:9
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:TGTCCTTGGTGTTCAT
---------TGTTTAC
 A C G T A C T G C G A T A G T C A G T C A G C T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A G T C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G G A C T C A G T A C G T G C T A A G T C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGTCCTTGGTGTTCAT
NTGACCTTGA-------
 A C G T A C G T A C T G C G A T A G T C A G T C A G C T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A G T C C G T A A G C T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T