Information for 9-SMCCANDGMCACT (Motif 26)

A T C G G T A C A G T C G T A C C T G A G T A C C G A T C T A G G T C A G A T C C T G A G T A C G C A T
Reverse Opposite:
C G T A A C T G A G C T C T A G C A G T A G T C G C A T C A T G A G C T A C T G C T A G A C T G T A G C
p-value:1e-6
log p-value:-1.456e+01
Information Content per bp:1.599
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif7.97%
Number of Background Sequences with motif1569.6
Percentage of Background Sequences with motif3.48%
Average Position of motif in Targets53.1 +/- 25.9bp
Average Position of motif in Background50.1 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--SMCCANDGMCACT
CCGCCCAAGGGCAG-
 A C G T A C G T A T C G G T A C A G T C G T A C C T G A G T A C C G A T C T A G G T C A G A T C C T G A G T A C G C A T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:SMCCANDGMCACT
--CAAAGGTCAG-
 A T C G G T A C A G T C G T A C C T G A G T A C C G A T C T A G G T C A G A T C C T G A G T A C G C A T
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:SMCCANDGMCACT
---CAAGGHCANV
 A T C G G T A C A G T C G T A C C T G A G T A C C G A T C T A G G T C A G A T C C T G A G T A C G C A T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:SMCCANDGMCACT
---ARNTGACA--
 A T C G G T A C A G T C G T A C C T G A G T A C C G A T C T A G G T C A G A T C C T G A G T A C G C A T
A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-SMCCANDGMCACT
TGCCCCAGGGCA--
 A C G T A T C G G T A C A G T C G T A C C T G A G T A C C G A T C T A G G T C A G A T C C T G A G T A C G C A T
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:SMCCANDGMCACT
-BTCAAGGTCA--
 A T C G G T A C A G T C G T A C C T G A G T A C C G A T C T A G G T C A G A T C C T G A G T A C G C A T
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-SMCCANDGMCACT
TGCCCCAGGGCA--
 A C G T A T C G G T A C A G T C G T A C C T G A G T A C C G A T C T A G G T C A G A T C C T G A G T A C G C A T
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-SMCCANDGMCACT
TGCCCCCGGGCA--
 A C G T A T C G G T A C A G T C G T A C C T G A G T A C C G A T C T A G G T C A G A T C C T G A G T A C G C A T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:SMCCANDGMCACT
-NTCAAGGTCA--
 A T C G G T A C A G T C G T A C C T G A G T A C C G A T C T A G G T C A G A T C C T G A G T A C G C A T
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:SMCCANDGMCACT
--TCAAGGTCAN-
 A T C G G T A C A G T C G T A C C T G A G T A C C G A T C T A G G T C A G A T C C T G A G T A C G C A T
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T