Information for 10-TGGTCAAAAC (Motif 25)

A C G T A C T G A C T G A C G T A G T C G T C A C G T A C G T A C G T A A T G C
Reverse Opposite:
A T C G A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A
p-value:1e-7
log p-value:-1.734e+01
Information Content per bp:1.939
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif14.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.8 +/- 28.6bp
Average Position of motif in Background59.0 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarg/MA0859.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGGTCAAAAC-----
AAGGTCAAAAGGTCAA
 A C G T A C G T A C T G A C T G A C G T A G T C G T C A C G T A C G T A C G T A A T G C A C G T A C G T A C G T A C G T A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGGTCAAAAC
AGGTCA----
 A C G T A C T G A C T G A C G T A G T C G T C A C G T A C G T A C G T A A T G C
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

Rarb/MA0857.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGGTCAAAAC----
AAAGGTCAAAAGGTCA
 A C G T A C G T A C G T A C T G A C T G A C G T A G T C G T C A C G T A C G T A C G T A A T G C A C G T A C G T A C G T A C G T
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGGTCAAAAC------
AACACCAAAACAAAGGA
 A C G T A C G T A C T G A C T G A C G T A G T C G T C A C G T A C G T A C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGGTCAAAAC----
GAGGTCAAAAGGTCA
 A C G T A C G T A C T G A C T G A C G T A G T C G T C A C G T A C G T A C G T A A T G C A C G T A C G T A C G T A C G T
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

RARA/MA0729.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGGTCAAAAC-------
GAGGTCAAAAGGTCAATG
 A C G T A C G T A C T G A C T G A C G T A G T C G T C A C G T A C G T A C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TGGTCAAAAC-
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C G T C A C G T A C G T A C G T A A T G C A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGGTCAAAAC
AGRGGTCA----
 A C G T A C G T A C G T A C T G A C T G A C G T A G T C G T C A C G T A C G T A C G T A A T G C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:9
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------TGGTCAAAAC
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C G T C A C G T A C G T A C G T A A T G C
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TGGTCAAAAC-
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C G T C A C G T A C G T A C G T A A T G C A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A