Information for 15-CARACAAGAAGCAGAN (Motif 23)

A G T C G T C A C T A G C T G A G T A C G T C A C G T A C T A G G T C A C G T A A C T G G T A C C G T A C T A G T G C A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A C T G G T A C C G A T A C G T A G T C A C G T A C G T A C T G G A C T A G T C A C G T A C T G
p-value:1e-8
log p-value:-1.932e+01
Information Content per bp:1.738
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.0 +/- 16.9bp
Average Position of motif in Background27.0 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CARACAAGAAGCAGAN
AACAAACAACAAGAG---
 A C G T A C G T A G T C G T C A C T A G C T G A G T A C G T C A C G T A C T A G G T C A C G T A A C T G G T A C C G T A C T A G T G C A A G T C
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CARACAAGAAGCAGAN
NCAGATAAGAANNN---
 A C G T A G T C G T C A C T A G C T G A G T A C G T C A C G T A C T A G G T C A C G T A A C T G G T A C C G T A C T A G T G C A A G T C
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CARACAAGAAGCAGAN-
-----AGGAAACAGCTG
 A G T C G T C A C T A G C T G A G T A C G T C A C G T A C T A G G T C A C G T A A C T G G T A C C G T A C T A G T G C A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CARACAAGAAGCAGAN
AAGGCAAGTGT-----
 A G T C G T C A C T A G C T G A G T A C G T C A C G T A C T A G G T C A C G T A A C T G G T A C C G T A C T A G T G C A A G T C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CARACAAGAAGCAGAN
ANAGATAAGAA------
 A C G T A G T C G T C A C T A G C T G A G T A C G T C A C G T A C T A G G T C A C G T A A C T G G T A C C G T A C T A G T G C A A G T C
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:6
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CARACAAGAAGCAGAN
NGTGTTCAVTSAAGCGKAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A C T A G C T G A G T A C G T C A C G T A C T A G G T C A C G T A A C T G G T A C C G T A C T A G T G C A A G T C
A G C T T A C G C G A T T C A G A G C T A C G T G A T C C T G A T A G C A G C T A T G C C T G A C G T A A T C G A G T C C T A G A C T G C T G A G T C A T C G A A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CARACAAGAAGCAGAN
------NGAAGC----
 A G T C G T C A C T A G C T G A G T A C G T C A C G T A C T A G G T C A C G T A A C T G G T A C C G T A C T A G T G C A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CARACAAGAAGCAGAN
NNTGTAGGTAGCANNT
 A G T C G T C A C T A G C T G A G T A C G T C A C G T A C T A G G T C A C G T A A C T G G T A C C G T A C T A G T G C A A G T C
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CARACAAGAAGCAGAN
--AACAGGAAGT----
 A G T C G T C A C T A G C T G A G T A C G T C A C G T A C T A G G T C A C G T A A C T G G T A C C G T A C T A G T G C A A G T C
A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CARACAAGAAGCAGAN
CCAATCAA---------
 A C G T A G T C G T C A C T A G C T G A G T A C G T C A C G T A C T A G G T C A C G T A A C T G G T A C C G T A C T A G T G C A A G T C
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T