Information for 9-CTGCWTGCAGCCASCA (Motif 14)

T A G C C G A T A T C G A T G C G C T A A G C T C T A G A G T C C G T A A C T G A T G C A G T C G T C A A T G C A G T C G T C A
Reverse Opposite:
A C G T C T A G T A C G A C G T A C T G A T C G G T A C A C G T A C T G A G T C C T G A C G A T A T C G A T G C C G T A A C T G
p-value:1e-9
log p-value:-2.187e+01
Information Content per bp:1.690
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif3.08%
Number of Background Sequences with motif186.2
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets48.0 +/- 24.7bp
Average Position of motif in Background48.2 +/- 40.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CTGCWTGCAGCCASCA
------BCAGACWA--
 T A G C C G A T A T C G A T G C G C T A A G C T C T A G A G T C C G T A A C T G A T G C A G T C G T C A A T G C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTGCWTGCAGCCASCA
----TBGCACGCAA--
 T A G C C G A T A T C G A T G C G C T A A G C T C T A G A G T C C G T A A C T G A T G C A G T C G T C A A T G C A G T C G T C A
A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CTGCWTGCAGCCASCA
-----CACAGN-----
 T A G C C G A T A T C G A T G C G C T A A G C T C T A G A G T C C G T A A C T G A T G C A G T C G T C A A T G C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:4
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CTGCWTGCAGCCASCA
------TCAGTCTT--
 T A G C C G A T A T C G A T G C G C T A A G C T C T A G A G T C C G T A A C T G A T G C A G T C G T C A A T G C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CTGCWTGCAGCCASCA
------CCAGACRSVB
 T A G C C G A T A T C G A T G C G C T A A G C T C T A G A G T C C G T A A C T G A T G C A G T C G T C A A T G C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CTGCWTGCAGCCASCA
------CCAGACAG--
 T A G C C G A T A T C G A T G C G C T A A G C T C T A G A G T C C G T A A C T G A T G C A G T C G T C A A T G C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:7
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CTGCWTGCAGCCASCA-----
------SCAGYCADGCATGAC
 T A G C C G A T A T C G A T G C G C T A A G C T C T A G A G T C C G T A A C T G A T G C A G T C G T C A A T G C A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CTGCWTGCAGCCASCA
--GGACACACCCCC--
 T A G C C G A T A T C G A T G C G C T A A G C T C T A G A G T C C G T A A C T G A T G C A G T C G T C A A T G C A G T C G T C A
A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.49
Offset:7
Orientation:forward strand
Alignment:CTGCWTGCAGCCASCA
-------CTGCCCGCA
 T A G C C G A T A T C G A T G C G C T A A G C T C T A G A G T C C G T A A C T G A T G C A G T C G T C A A T G C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:CTGCWTGCAGCCASCA
-------CACGCA---
 T A G C C G A T A T C G A T G C G C T A A G C T C T A G A G T C C G T A A C T G A T G C A G T C G T C A A T G C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T