Information for 3-ACAATTGTATYTTTAA (Motif 6)

C G T A T A G C C T G A G T C A G A C T C G A T C A T G C A G T G T C A C G A T G A T C A C G T G C A T A C G T G C T A C G T A
Reverse Opposite:
A C G T C G A T G T C A C G T A G T C A C T A G G C T A C A G T G C T A G T A C C G T A C T G A C A G T A G C T A T C G A C G T
p-value:1e-7
log p-value:-1.766e+01
Information Content per bp:1.673
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif5.91%
Number of Background Sequences with motif453.5
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets49.1 +/- 24.7bp
Average Position of motif in Background50.9 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACAATTGTATYTTTAA--
-NNNNTTTTTTTTTNAAC
 C G T A T A G C C T G A G T C A G A C T C G A T C A T G C A G T G T C A C G A T G A T C A C G T G C A T A C G T G C T A C G T A A C G T A C G T
A C G T C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

Foxd3/MA0041.1/Jaspar

Match Rank:2
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ACAATTGTATYTTTAA
--GAATGTTTGTTT--
 C G T A T A G C C T G A G T C A G A C T C G A T C A T G C A G T G T C A C G A T G A T C A C G T G C A T A C G T G C T A C G T A
A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ACAATTGTATYTTTAA--
-GNATTTTTTTTTTGANC
 C G T A T A G C C T G A G T C A G A C T C G A T C A T G C A G T G T C A C G A T G A T C A C G T G C A T A C G T G C T A C G T A A C G T A C G T
A C G T C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

Arid3a/MA0151.1/Jaspar

Match Rank:4
Score:0.53
Offset:11
Orientation:reverse strand
Alignment:ACAATTGTATYTTTAA-
-----------TTTAAT
 C G T A T A G C C T G A G T C A G A C T C G A T C A T G C A G T G T C A C G A T G A T C A C G T G C A T A C G T G C T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------ACAATTGTATYTTTAA
NNCNNAACAATTNT--------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C C T G A G T C A G A C T C G A T C A T G C A G T G T C A C G A T G A T C A C G T G C A T A C G T G C T A C G T A
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX21/MA0866.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ACAATTGTATYTTTAA
AACAATGGTAGTGTT--
 A C G T C G T A T A G C C T G A G T C A G A C T C G A T C A T G C A G T G T C A C G A T G A T C A C G T G C A T A C G T G C T A C G T A
C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ACAATTGTATYTTTAA
RNAACAATGG---------
 A C G T A C G T A C G T C G T A T A G C C T G A G T C A G A C T C G A T C A T G C A G T G T C A C G A T G A T C A C G T G C A T A C G T G C T A C G T A
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------ACAATTGTATYTTTAA
TNCNNAACAATTTTTNC-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C C T G A G T C A G A C T C G A T C A T G C A G T G T C A C G A T G A T C A C G T G C A T A C G T G C T A C G T A
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C A C G T A C G T A C G T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:ACAATTGTATYTTTAA--
-----TTAATGTTTAACC
 C G T A T A G C C T G A G T C A G A C T C G A T C A T G C A G T G T C A C G A T G A T C A C G T G C A T A C G T G C T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:10
Score:0.51
Offset:11
Orientation:reverse strand
Alignment:ACAATTGTATYTTTAA-----
-----------TTTAATTGCN
 C G T A T A G C C T G A G T C A G A C T C G A T C A T G C A G T G T C A C G A T G A T C A C G T G C A T A C G T G C T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C