Information for 2-TCAGTGATCAGGA (Motif 5)

C A G T A G T C C G T A A C T G G A C T T A C G C T G A A G C T A T G C C G T A C T A G T A C G G T C A
Reverse Opposite:
A C G T A G T C A G T C A C G T A T C G T C G A G A C T A T G C C G T A G T A C A C G T C T A G G T C A
p-value:1e-7
log p-value:-1.780e+01
Information Content per bp:1.717
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.76%
Number of Background Sequences with motif54.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets65.6 +/- 18.6bp
Average Position of motif in Background50.1 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCAGTGATCAGGA
TCAGTCTT-----
 C A G T A G T C C G T A A C T G G A C T T A C G C T G A A G C T A T G C C G T A C T A G T A C G G T C A
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCAGTGATCAGGA-
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T C A G T A G T C C G T A A C T G G A C T T A C G C T G A A G C T A T G C C G T A C T A G T A C G G T C A A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCAGTGATCAGGA
-CAAAGGTCAG--
 C A G T A G T C C G T A A C T G G A C T T A C G C T G A A G C T A T G C C G T A C T A G T A C G G T C A
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCAGTGATCAGGA
TCATCAATCA---
 C A G T A G T C C G T A A C T G G A C T T A C G C T G A A G C T A T G C C G T A C T A G T A C G G T C A
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:TCAGTGATCAGGA---
------ANCAGGATGT
 C A G T A G T C C G T A A C T G G A C T T A C G C T G A A G C T A T G C C G T A C T A G T A C G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

Foxo1/MA0480.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCAGTGATCAGGA
--TGTAAACAGGA
 C A G T A G T C C G T A A C T G G A C T T A C G C T G A A G C T A T G C C G T A C T A G T A C G G T C A
A C G T A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TCAGTGATCAGGA
GAGGTCAAAGGTCA---
 A C G T A C G T A C G T A C G T C A G T A G T C C G T A A C T G G A C T T A C G C T G A A G C T A T G C C G T A C T A G T A C G G T C A
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TCAGTGATCAGGA
AGGGGTCAGAGGTCA---
 A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A C T G G A C T T A C G C T G A A G C T A T G C C G T A C T A G T A C G G T C A
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------TCAGTGATCAGGA
NNNNTGCCAGTGATTG---
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A C T G G A C T T A C G C T G A A G C T A T G C C G T A C T A G T A C G G T C A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TCAGTGATCAGGA--
GGCGAGGGGTCAAGGGC
 A C G T A C G T C A G T A G T C C G T A A C T G G A C T T A C G C T G A A G C T A T G C C G T A C T A G T A C G G T C A A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C