Information for 2-KATYMKCWGGRACTTC (Motif 3)

A C T G C G T A A C G T A G T C G T C A A C G T A G T C C G A T A C T G A C T G C T G A C G T A A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G A C G T A G C T A G T C A G T C C G T A A C T G G T C A A C G T C T A G G T C A A C G T G T A C
p-value:1e-9
log p-value:-2.151e+01
Information Content per bp:1.848
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.4 +/- 14.9bp
Average Position of motif in Background60.8 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.55
Offset:8
Orientation:forward strand
Alignment:KATYMKCWGGRACTTC--
--------GGAAATTCCC
 A C T G C G T A A C G T A G T C G T C A A C G T A G T C C G A T A C T G A C T G C T G A C G T A A G T C A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.54
Offset:11
Orientation:forward strand
Alignment:KATYMKCWGGRACTTC-
-----------GCTTCC
 A C T G C G T A A C G T A G T C G T C A A C G T A G T C C G A T A C T G A C T G C T G A C G T A A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.54
Offset:7
Orientation:forward strand
Alignment:KATYMKCWGGRACTTC-
-------GGGAATTTCC
 A C T G C G T A A C G T A G T C G T C A A C G T A G T C C G A T A C T G A C T G C T G A C G T A A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.54
Offset:7
Orientation:forward strand
Alignment:KATYMKCWGGRACTTC-
-------GGGGATTTCC
 A C T G C G T A A C G T A G T C G T C A A C G T A G T C C G A T A C T G A C T G C T G A C G T A A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:KATYMKCWGGRACTTC
----NACAGGAAAT--
 A C T G C G T A A C G T A G T C G T C A A C G T A G T C C G A T A C T G A C T G C T G A C G T A A G T C A C G T A C G T A G T C
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:KATYMKCWGGRACTTC
----NACAGGAAAT--
 A C T G C G T A A C G T A G T C G T C A A C G T A G T C C G A T A C T G A C T G C T G A C G T A A G T C A C G T A C G T A G T C
A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:7
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:KATYMKCWGGRACTTC-------
---------NNACTTCCTCTTNN
 A C T G C G T A A C G T A G T C G T C A A C G T A G T C C G A T A C T G A C T G C T G A C G T A A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A

Stat6/MA0520.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:KATYMKCWGGRACTTC
ANTTCTCAGGAANNN-
 A C T G C G T A A C G T A G T C G T C A A C G T A G T C C G A T A C T G A C T G C T G A C G T A A G T C A C G T A C G T A G T C
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:KATYMKCWGGRACTTC
--TTCTNMGGAA----
 A C T G C G T A A C G T A G T C G T C A A C G T A G T C C G A T A C T G A C T G C T G A C G T A A G T C A C G T A C G T A G T C
A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T A C G T A C G T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:10
Score:0.53
Offset:11
Orientation:reverse strand
Alignment:KATYMKCWGGRACTTC-----
-----------ACTTCCTBGT
 A C T G C G T A A C G T A G T C G T C A A C G T A G T C C G A T A C T G A C T G C T G A C G T A A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C A G C T C G A T A G T C A T G C A C G T A T G C T C A G C G A T