Information for 4-TAATAAAATAGAT (Motif 7)

A C G T C G T A C G T A C G A T C G T A C G T A C T G A C G T A A C G T C G T A A C T G C G T A C G A T
Reverse Opposite:
C G T A C G A T A G T C C G A T C G T A C G A T A G C T A C G T A C G T C G T A A C G T A C G T C G T A
p-value:1e-7
log p-value:-1.668e+01
Information Content per bp:1.862
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif6.49%
Number of Background Sequences with motif63.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets47.5 +/- 21.4bp
Average Position of motif in Background50.9 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TAATAAAATAGAT
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C G T A C G T A C T G A C G T A A C G T C G T A A C T G C G T A C G A T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PH0046.1_Hoxa10/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TAATAAAATAGAT
TAGGTAATAAAATTCA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C G T A C G T A C T G A C G T A A C G T C G T A A C T G C G T A C G A T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TAATAAAATAGAT
GTCATAAAAN----
 A C G T A C G T C G T A C G T A C G A T C G T A C G T A C T G A C G T A A C G T C G T A A C T G C G T A C G A T
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TAATAAAATAGAT
CTACCAATAAAATTCT-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C G T A C G T A C T G A C G T A A C G T C G T A A C T G C G T A C G A T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAATAAAATAGAT
GGTAATAAAAA----
 A C G T A C G T A C G T C G T A C G T A C G A T C G T A C G T A C T G A C G T A A C G T C G T A A C T G C G T A C G A T
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAATAAAATAGAT
CCAATAAAAA----
 A C G T A C G T C G T A C G T A C G A T C G T A C G T A C T G A C G T A A C G T C G T A A C T G C G T A C G A T
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAATAAAATAGAT
NCYAATAAAA-----
 A C G T A C G T A C G T C G T A C G T A C G A T C G T A C G T A C T G A C G T A A C G T C G T A A C T G C G T A C G A T
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAATAAAATAGAT
ATGCTAAAAATAGAA
 A C G T A C G T A C G T C G T A C G T A C G A T C G T A C G T A C T G A C G T A A C G T C G T A A C T G C G T A C G A T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

PH0038.1_Hlx/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TAATAAAATAGAT
CCATAATTAATTACA-
 A C G T A C G T A C G T A C G T C G T A C G T A C G A T C G T A C G T A C T G A C G T A A C G T C G T A A C T G C G T A C G A T
G T A C G T A C G T C A G A C T G C T A C G T A G A C T G C A T C T G A C T G A G C A T C G A T C T G A G A T C G T C A A C G T

CDX1/MA0878.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAATAAAATAGAT
GCAATAAAA-----
 A C G T A C G T C G T A C G T A C G A T C G T A C G T A C T G A C G T A A C G T C G T A A C T G C G T A C G A T
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T A C G T