Information for 1-AAGTTCAAAA (Motif 4)

C G T A C T G A A C T G A C G T C G A T G T A C C G T A G T C A C G T A C G T A
Reverse Opposite:
C G A T A C G T C A G T A C G T A C T G C G T A C G T A A G T C A G C T A C G T
p-value:1e-9
log p-value:-2.108e+01
Information Content per bp:1.870
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif10.39%
Number of Background Sequences with motif187.9
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets47.0 +/- 31.9bp
Average Position of motif in Background48.7 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AAGTTCAAAA
-NATTCAAAT
 C G T A C T G A A C T G A C G T C G A T G T A C C G T A G T C A C G T A C G T A
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAGTTCAAAA
CGGTTTCAAA-
 A C G T C G T A C T G A A C T G A C G T C G A T G T A C C G T A G T C A C G T A C G T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGTTCAAAA---
AAAGATCAAAGGAA
 A C G T C G T A C T G A A C T G A C G T C G A T G T A C C G T A G T C A C G T A C G T A A C G T A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAGTTCAAAA-
-ACATCAAAGG
 C G T A C T G A A C T G A C G T C G A T G T A C C G T A G T C A C G T A C G T A A C G T
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

Tcf7/MA0769.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGTTCAAAA-
AAAGATCAAAGG
 A C G T C G T A C T G A A C T G A C G T C G A T G T A C C G T A G T C A C G T A C G T A A C G T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

Rarb/MA0857.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGTTCAAAA-----
AAAGGTCAAAAGGTCA
 A C G T C G T A C T G A A C T G A C G T C G A T G T A C C G T A G T C A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAGTTCAAAA
TCAAGGTCATA-
 A C G T A C G T C G T A C T G A A C T G A C G T C G A T G T A C C G T A G T C A C G T A C G T A
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAGTTCAAAA
TCAAGGTCAT--
 A C G T A C G T C G T A C T G A A C T G A C G T C G A T G T A C C G T A G T C A C G T A C G T A
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAGTTCAAAA------
AAGGTCAAAAGGTCAA
 C G T A C T G A A C T G A C G T C G A T G T A C C G T A G T C A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAGTTCAAAA----
AAAGATCAAAGGGTT
 A C G T C G T A C T G A A C T G A C G T C G A T G T A C C G T A G T C A C G T A C G T A A C G T A C G T A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T