Information for 5-GAACTAATGC (Motif 12)

A C T G C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C G T C G T A A C T G A C G T A C G T A G T C
p-value:1e-2
log p-value:-6.465e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 0.0bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC/MA0648.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAACTAATGC--
--GCTAATCCCC
 A C T G C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

GSC2/MA0891.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GAACTAATGC--
--CCTAATCCGC
 A C T G C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

PB0096.1_Zfp187_1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAACTAATGC
TTATGTACTAATAA
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

PH0129.1_Otx1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAACTAATGC-----
NNNAATTAATCCCCNCN
 A C G T A C G T A C T G C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAACTAATGC-
---YTAATCCY
 A C T G C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAACTAATGC-
--CTTAATCCC
 A C T G C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C A C G T
A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

HMBOX1/MA0895.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAACTAATGC
GTTAACTAGN--
 A C G T A C G T A C T G C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GAACTAATGC--
----TAATCCCN
 A C T G C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

Dmbx1/MA0883.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAACTAATGC------
NNNATTAATCCGNTTNA
 A C G T A C T G C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAACTAATGC------
NNNATTAATCCGNTTNA
 A C G T A C T G C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A