Information for 4-TTCCTTCTYCTTCAGT (Motif 6)

A C G T A C G T A G T C G T A C A C G T A C G T A G T C G C A T G A T C G A T C A C G T A C G T A T G C C G T A C T A G A C G T
Reverse Opposite:
G T C A A G T C A C G T A T C G C G T A C G T A C A T G C T A G C G T A A C T G C G T A G T C A A C T G C T A G G T C A C G T A
p-value:1e-14
log p-value:-3.235e+01
Information Content per bp:1.780
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.5 +/- 25.6bp
Average Position of motif in Background53.3 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTCCTTCTYCTTCAGT--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C G T A G T C G C A T G A T C G A T C A C G T A C G T A T G C C G T A C T A G A C G T A C G T A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTCCTTCTYCTTCAGT--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C G T A G T C G C A T G A T C G A T C A C G T A C G T A T G C C G T A C T A G A C G T A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

IRF1/MA0050.2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TTCCTTCTYCTTCAGT--
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C G T A G T C G C A T G A T C G A T C A C G T A C G T A T G C C G T A C T A G A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TTCCTTCTYCTTCAGT-
--CTTTCANTATGACTV
 A C G T A C G T A G T C G T A C A C G T A C G T A G T C G C A T G A T C G A T C A C G T A C G T A T G C C G T A C T A G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TTCCTTCTYCTTCAGT--
NAGTTTCABTHTGACTNW
 A C G T A C G T A G T C G T A C A C G T A C G T A G T C G C A T G A T C G A T C A C G T A C G T A T G C C G T A C T A G A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TTCCTTCTYCTTCAGT
-ACTTTCACTTTC---
 A C G T A C G T A G T C G T A C A C G T A C G T A G T C G C A T G A T C G A T C A C G T A C G T A T G C C G T A C T A G A C G T
A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TTCCTTCTYCTTCAGT-------
---TTTMCGCTTSABTGAACACN
 A C G T A C G T A G T C G T A C A C G T A C G T A G T C G C A T G A T C G A T C A C G T A C G T A T G C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TTCCTTCTYCTTCAGT-----
-GCCTCCTCCMTCWGACTGKS
 A C G T A C G T A G T C G T A C A C G T A C G T A G T C G C A T G A T C G A T C A C G T A C G T A T G C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TTCCTTCTYCTTCAGT
NNCATTCATTCATNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C G T A G T C G C A T G A T C G A T C A C G T A C G T A T G C C G T A C T A G A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T A C G T A C G T A C G T

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--TTCCTTCTYCTTCAGT--
RTTKCADNNKRTTGCATNAN
 A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C G T A G T C G C A T G A T C G A T C A C G T A C G T A T G C C G T A C T A G A C G T A C G T A C G T
T C G A C G A T A C G T C A T G T A G C G C T A C A G T A G C T T G A C C A G T T C G A A G C T A C G T C A T G G T A C G T C A G C A T G C T A C G T A A C G T