Information for 17-GCCACCCAAC (Motif 44)

A C T G A G T C G T A C C G T A A G T C A G T C A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A C T G A C T G A C G T A C T G A C T G A G T C
p-value:1e-3
log p-value:-8.973e+00
Information Content per bp:1.961
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets59.8 +/- 17.2bp
Average Position of motif in Background58.6 +/- 35.7bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GCCACCCAAC-
ACTATGCCAACCTACC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C C G T A A G T C A G T C A G T C C G T A C G T A A G T C A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GCCACCCAAC--
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C C G T A A G T C A G T C A G T C C G T A C G T A A G T C A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCCACCCAAC
AGCCACTCAAG
 A C G T A C T G A G T C G T A C C G T A A G T C A G T C A G T C C G T A C G T A A G T C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCCACCCAAC
GGACCACCCACG
 A C G T A C G T A C T G A G T C G T A C C G T A A G T C A G T C A G T C C G T A C G T A A G T C
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

ZNF740/MA0753.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCACCCAAC
CCCCCCCCAC
 A C T G A G T C G T A C C G T A A G T C A G T C A G T C C G T A C G T A A G T C
T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCCACCCAAC---
AAGCCCCCCAAAAAT
 A C G T A C G T A C T G A G T C G T A C C G T A A G T C A G T C A G T C C G T A C G T A A G T C A C G T A C G T A C G T
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCCACCCAAC
ATGCCAACC---
 A C G T A C G T A C T G A G T C G T A C C G T A A G T C A G T C A G T C C G T A C G T A A G T C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCCACCCAAC
GCGACCACCGAA-
 A C G T A C G T A C G T A C T G A G T C G T A C C G T A A G T C A G T C A G T C C G T A C G T A A G T C
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCCACCCAAC
CNGTCACGCCAC
 A C G T A C G T A C T G A G T C G T A C C G T A A G T C A G T C A G T C C G T A C G T A A G T C
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

PB0147.1_Max_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCACCCAAC--
GTGCCACGCGACTG
 A C G T A C G T A C T G A G T C G T A C C G T A A G T C A G T C A G T C C G T A C G T A A G T C A C G T A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G