Information for 24-ATGCTTAGTGTGAATA (Motif 43)

C G T A A C G T A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C G T C G T A C G T A A C T G A G T C C G T A A C G T
p-value:1e-4
log p-value:-9.333e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.5 +/- 22.9bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EOMES/MA0800.1/Jaspar

Match Rank:1
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ATGCTTAGTGTGAATA-
----AAGGTGTGAAAAT
 C G T A A C G T A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A A C G T
A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ATGCTTAGTGTGAATA
CAATGCATTGTGGGTA--
 A C G T A C G T C G T A A C G T A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ATGCTTAGTGTGAATA--
-GAAAAGGTGTGAAAATT
 C G T A A C G T A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:ATGCTTAGTGTGAATA
-----AGGTGTTAAT-
 C G T A A C G T A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:ATGCTTAGTGTGAATA
-----AGGTGTGAAA-
 C G T A A C G T A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:forward strand
Alignment:ATGCTTAGTGTGAATA-
------TATGTAAATAT
 C G T A A C G T A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

TBX20/MA0689.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:ATGCTTAGTGTGAATA
----TAGGTGTGAAG-
 C G T A A C G T A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A
A C G T A C G T A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:ATGCTTAGTGTGAATA
----AAGGTGTGAA--
 C G T A A C G T A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A
A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:ATGCTTAGTGTGAATA
-----AGGTGTGAAM-
 C G T A A C G T A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A
A C G T A C G T A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T

TBX2/MA0688.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:ATGCTTAGTGTGAATA
----AAGGTGTGAAA-
 C G T A A C G T A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A
A C G T A C G T A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T