Information for 21-MTCTCTCTCTCTC (Motif 41)

G T C A A C G T A T G C A C G T A G T C A G C T A T G C A G C T A G T C C G A T A G T C C G A T T G A C
Reverse Opposite:
A C T G C G T A C T A G C G T A A C T G C T G A A T C G C T G A A C T G C G T A A T C G G T C A C A G T
p-value:1e-5
log p-value:-1.226e+01
Information Content per bp:1.801
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif90.1
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets35.2 +/- 20.0bp
Average Position of motif in Background45.6 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)4.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:MTCTCTCTCTCTC
-ACTTTCACTTTC
 G T C A A C G T A T G C A C G T A G T C A G C T A T G C A G C T A G T C C G A T A G T C C G A T T G A C
A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:MTCTCTCTCTCTC--
ACCACTCTCGGTCAC
 G T C A A C G T A T G C A C G T A G T C A G C T A T G C A G C T A G T C C G A T A G T C C G A T T G A C A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:MTCTCTCTCTCTC
-TGTCTGDCACCT
 G T C A A C G T A T G C A C G T A G T C A G C T A T G C A G C T A G T C C G A T A G T C C G A T T G A C
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-MTCTCTCTCTCTC-
TCACTTTCACTTTCN
 A C G T G T C A A C G T A T G C A C G T A G T C A G C T A T G C A G C T A G T C C G A T A G T C C G A T T G A C A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:MTCTCTCTCTCTC
CTGTCTGTCACCT
 G T C A A C G T A T G C A C G T A G T C A G C T A T G C A G C T A G T C C G A T A G T C C G A T T G A C
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:MTCTCTCTCTCTC
-ACTTTCACTTTC
 G T C A A C G T A T G C A C G T A G T C A G C T A T G C A G C T A G T C C G A T A G T C C G A T T G A C
A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--MTCTCTCTCTCTC
NNAATTCTCGNTNAN
 A C G T A C G T G T C A A C G T A T G C A C G T A G T C A G C T A T G C A G C T A G T C C G A T A G T C C G A T T G A C
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:MTCTCTCTCTCTC--
---NCTGTCAATCAN
 G T C A A C G T A T G C A C G T A G T C A G C T A T G C A G C T A G T C C G A T A G T C C G A T T G A C A C G T A C G T
A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:MTCTCTCTCTCTC
-GCTCGGSCTC--
 G T C A A C G T A T G C A C G T A G T C A G C T A T G C A G C T A G T C C G A T A G T C C G A T T G A C
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----MTCTCTCTCTCTC-
GTTTTGCTTTCACTTTCC
 A C G T A C G T A C G T A C G T G T C A A C G T A T G C A C G T A G T C A G C T A T G C A G C T A G T C C G A T A G T C C G A T T G A C A C G T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C