Information for 22-AYAWDACCATGGTWWT (Motif 38)

C G T A A G C T C G T A C G A T C A G T C G T A A G T C G T A C C T G A A G C T A C T G A C T G C G A T C G A T C G A T A C G T
Reverse Opposite:
C G T A C G A T C G A T C G T A A G T C G T A C C T G A A G C T A C T G A C T G A C G T G A C T C G A T A C G T C T A G A C G T
p-value:1e-6
log p-value:-1.475e+01
Information Content per bp:1.788
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.6 +/- 22.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox1/MA0870.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AYAWDACCATGGTWWT
AACAATAACATTGTT--
 A C G T C G T A A G C T C G T A C G A T C A G T C G T A A G T C G T A C C T G A A G C T A C T G A C T G C G A T C G A T C G A T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T A C G T A C G T

SOX21/MA0866.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AYAWDACCATGGTWWT
AACACTACCATTGTT--
 A C G T C G T A A G C T C G T A C G A T C A G T C G T A A G T C G T A C C T G A A G C T A C T G A C T G C G A T C G A T C G A T A C G T
T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AYAWDACCATGGTWWT
--VRAACAATGG----
 C G T A A G C T C G T A C G A T C A G T C G T A A G T C G T A C C T G A A G C T A C T G A C T G C G A T C G A T C G A T A C G T
A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AYAWDACCATGGTWWT
--AAAACAATGG----
 C G T A A G C T C G T A C G A T C A G T C G T A A G T C G T A C C T G A A G C T A C T G A C T G C G A T C G A T C G A T A C G T
A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AYAWDACCATGGTWWT
----AACAAAGG----
 C G T A A G C T C G T A C G A T C A G T C G T A A G T C G T A C C T G A A G C T A C T G A C T G C G A T C G A T C G A T A C G T
A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AYAWDACCATGGTWWT---
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T C G T A A G C T C G T A C G A T C A G T C G T A A G T C G T A C C T G A A G C T A C T G A C T G C G A T C G A T C G A T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0070.1_Sox30_1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AYAWDACCATGGTWWT
AATGAACAATGGAATT
 C G T A A G C T C G T A C G A T C A G T C G T A A G T C G T A C C T G A A G C T A C T G A C T G C G A T C G A T C G A T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AYAWDACCATGGTWWT
---RAACAATGGN---
 C G T A A G C T C G T A C G A T C A G T C G T A A G T C G T A C C T G A A G C T A C T G A C T G C G A T C G A T C G A T A C G T
A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AYAWDACCATGGTWWT
------CCATTGTTC-
 C G T A A G C T C G T A C G A T C A G T C G T A A G T C G T A C C T G A A G C T A C T G A C T G C G A T C G A T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AYAWDACCATGGTWWT
NNNNATGACCTTGANTN-
 A C G T A C G T C G T A A G C T C G T A C G A T C A G T C G T A A G T C G T A C C T G A A G C T A C T G A C T G C G A T C G A T C G A T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T