Information for 12-GAWCACWACASKA (Motif 21)

A C T G C G T A C G A T A G T C C G T A A G T C C G T A G C T A A G T C C T G A A T C G A C T G C G T A
Reverse Opposite:
A C G T G T A C A T G C A G C T A C T G C A G T C G A T A C T G A C G T A C T G C G T A A C G T A G T C
p-value:1e-8
log p-value:-2.046e+01
Information Content per bp:1.873
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.3 +/- 28.5bp
Average Position of motif in Background84.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GAWCACWACASKA-
ATGTCACAACAACAC
 A C G T A C T G C G T A C G A T A G T C C G T A A G T C C G T A G C T A A G T C C T G A A T C G A C T G C G T A A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAWCACWACASKA--
AACACCAAAACAAAGGA
 A C G T A C G T A C T G C G T A C G A T A G T C C G T A A G T C C G T A G C T A A G T C C T G A A T C G A C T G C G T A A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

SREBF2/MA0596.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAWCACWACASKA
-ATCACCCCAT--
 A C T G C G T A C G A T A G T C C G T A A G T C C G T A G C T A A G T C C T G A A T C G A C T G C G T A
A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAWCACWACASKA--
GAGCACAGCAGGACA
 A C T G C G T A C G A T A G T C C G T A A G T C C G T A G C T A A G T C C T G A A T C G A C T G C G T A A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0122.1_Foxk1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAWCACWACASKA
CAAACAACAACACCT
 A C G T A C G T A C T G C G T A C G A T A G T C C G T A A G T C C G T A G C T A A G T C C T G A A T C G A C T G C G T A
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAWCACWACASKA
-ATCACCCCAT--
 A C T G C G T A C G A T A G T C C G T A A G T C C G T A G C T A A G T C C T G A A T C G A C T G C G T A
A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAWCACWACASKA
-ATCACCCCAC--
 A C T G C G T A C G A T A G T C C G T A A G T C C G T A G C T A A G T C C T G A A T C G A C T G C G T A
A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAWCACWACASKA
CNGTCACGCCAC--
 A C G T A C T G C G T A C G A T A G T C C G T A A G T C C G T A G C T A A G T C C T G A A T C G A C T G C G T A
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAWCACWACASKA
-NWAACCACADNN
 A C T G C G T A C G A T A G T C C G T A A G T C C G T A G C T A A G T C C T G A A T C G A C T G C G T A
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAWCACWACASKA--
CCACACAGCAGGAGA
 A C T G C G T A C G A T A G T C C G T A A G T C C G T A G C T A A G T C C T G A A T C G A C T G C G T A A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A