Information for 12-SCTSTTACMYTRGYYC (Motif 19)

A T C G A G T C A C G T A T G C A C G T A C G T G T C A A G T C G T C A A G T C C G A T C T A G A C T G A G C T A G T C A G T C
Reverse Opposite:
A C T G C T A G C T G A A G T C A G T C C G T A C T A G A C G T A C T G A C G T C G T A C G T A A T C G C G T A A C T G T A C G
p-value:1e-9
log p-value:-2.092e+01
Information Content per bp:1.820
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.2 +/- 20.5bp
Average Position of motif in Background53.4 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Spz1/MA0111.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:SCTSTTACMYTRGYYC
GCTGTTACCCT-----
 A T C G A G T C A C G T A T G C A C G T A C G T G T C A A G T C G T C A A G T C C G A T C T A G A C T G A G C T A G T C A G T C
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-SCTSTTACMYTRGYYC
TKCTGTTCCA-------
 A C G T A T C G A G T C A C G T A T G C A C G T A C G T G T C A A G T C G T C A A G T C C G A T C T A G A C T G A G C T A G T C A G T C
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:SCTSTTACMYTRGYYC
NNACTTACCTN-----
 A T C G A G T C A C G T A T G C A C G T A C G T G T C A A G T C G T C A A G T C C G A T C T A G A C T G A G C T A G T C A G T C
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:SCTSTTACMYTRGYYC
NTTGATACATT-----
 A T C G A G T C A C G T A T G C A C G T A C G T G T C A A G T C G T C A A G T C C G A T C T A G A C T G A G C T A G T C A G T C
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:5
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---SCTSTTACMYTRGYYC
CCACCTGTTGCAT------
 A C G T A C G T A C G T A T C G A G T C A C G T A T G C A C G T A C G T G T C A A G T C G T C A A G T C C G A T C T A G A C T G A G C T A G T C A G T C
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:SCTSTTACMYTRGYYC--
----TGACCTTTGCCCTA
 A T C G A G T C A C G T A T G C A C G T A C G T G T C A A G T C G T C A A G T C C G A T C T A G A C T G A G C T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Barhl1/MA0877.1/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-SCTSTTACMYTRGYYC
NNCAATTANN-------
 A C G T A T C G A G T C A C G T A T G C A C G T A C G T G T C A A G T C G T C A A G T C C G A T C T A G A C T G A G C T A G T C A G T C
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.49
Offset:4
Orientation:forward strand
Alignment:SCTSTTACMYTRGYYC----
----GAGCCCTTGTCCCTAA
 A T C G A G T C A C G T A T G C A C G T A C G T G T C A A G T C G T C A A G T C C G A T C T A G A C T G A G C T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

NR2C2/MA0504.1/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---SCTSTTACMYTRGYYC
TGACCTCTGACCCCN----
 A C G T A C G T A C G T A T C G A G T C A C G T A T G C A C G T A C G T G T C A A G T C G T C A A G T C C G A T C T A G A C T G A G C T A G T C A G T C
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.48
Offset:4
Orientation:forward strand
Alignment:SCTSTTACMYTRGYYC--
----TGACCTTTGCCCCA
 A T C G A G T C A C G T A T G C A C G T A C G T G T C A A G T C G T C A A G T C C G A T C T A G A C T G A G C T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A