Information for 6-CTGAATGAAC (Motif 17)

A G T C A C G T A T C G C G T A C G T A A C G T A C T G C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A G T C C G T A A C G T A C G T A T G C C G T A A C T G
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.963
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.8 +/- 31.6bp
Average Position of motif in Background50.5 +/- 16.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---CTGAATGAAC---
ACTATGAATGAATGAT
 A C G T A C G T A C G T A G T C A C G T A T C G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

Vdr/MA0693.1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CTGAATGAAC--
TGAACTCNATGAACTC
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C G T
G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CTGAATGAAC--
TAATTCAATGAAGTG
 A C G T A C G T A C G T A G T C A C G T A T C G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CTGAATGAAC
NNTNTCATGAATGT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T C G C G T A C G T A A C G T A C T G C G T A C G T A A G T C
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTGAATGAAC----
CGACCCAATCAACGGTG
 A C G T A C G T A C G T A G T C A C G T A T C G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGAATGAAC-
TCCAATCCACA
 A G T C A C G T A T C G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGAATGAAC---
NNANTGATTGATNNNN
 A C G T A C G T A C G T A G T C A C G T A T C G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTGAATGAAC--
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T C G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

FOS::JUN/MA0099.2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTGAATGAAC
-TGACTCA--
 A G T C A C G T A T C G C G T A C G T A A C G T A C T G C G T A C G T A A G T C
A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T

PH0153.1_Prop1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGAATGAAC---
GNNTNTTAATTAATNCN
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T
C T A G G A C T G C A T G C A T G T A C G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A G C T A C G T A G T C A C T G