Information for 2-GGTGGCCCTG (Motif 8)

C A T G T A C G A G C T C T A G T C A G T A G C T G A C T G A C C G A T C A T G
Reverse Opposite:
G T A C G C T A A C T G A C T G A C T G A G T C G A T C T C G A A T G C G T A C
p-value:1e-8
log p-value:-2.045e+01
Information Content per bp:1.647
Number of Target Sequences with motif86.0
Percentage of Target Sequences with motif12.46%
Number of Background Sequences with motif2384.6
Percentage of Background Sequences with motif6.25%
Average Position of motif in Targets56.0 +/- 25.6bp
Average Position of motif in Background50.9 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGTGGCCCTG
BNTGDCCTTG
 C A T G T A C G A G C T C T A G T C A G T A G C T G A C T G A C C G A T C A T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGCCCTG--
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A C G T A C G T C A T G T A C G A G C T C T A G T C A G T A G C T G A C T G A C C G A T C A T G A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GGTGGCCCTG
CGTGGGTGGTCC--
 A C G T A C G T A C G T A C G T C A T G T A C G A G C T C T A G T C A G T A G C T G A C T G A C C G A T C A T G
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGTGGCCCTG--
--TGACCTTGAN
 C A T G T A C G A G C T C T A G T C A G T A G C T G A C T G A C C G A T C A T G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGTGGCCCTG----
NGTTGCCATGGCAA
 C A T G T A C G A G C T C T A G T C A G T A G C T G A C T G A C C G A T C A T G A C G T A C G T A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGTGGCCCTG-----
GCTGACCTTGAACTN
 C A T G T A C G A G C T C T A G T C A G T A G C T G A C T G A C C G A T C A T G A C G T A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGTGGCCCTG---
AAGGKGRCGCAGGCA
 A C G T A C G T C A T G T A C G A G C T C T A G T C A G T A G C T G A C T G A C C G A T C A T G A C G T A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGTGGCCCTG--
--TGACCTTGAV
 C A T G T A C G A G C T C T A G T C A G T A G C T G A C T G A C C G A T C A T G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGTGGCCCTG--
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A C G T C A T G T A C G A G C T C T A G T C A G T A G C T G A C T G A C C G A T C A T G A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGTGGCCCTG----
GGTTGCCATGGCAA
 C A T G T A C G A G C T C T A G T C A G T A G C T G A C T G A C C G A T C A T G A C G T A C G T A C G T A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A