Information for 7-TRTATRGTGTGTG (Motif 16)

A C G T C T G A A C G T C G T A A G C T C T G A A C T G A C G T A C T G A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C G T C A A G T C C G T A A G T C G T C A G T A C A G C T C T G A A C G T C G T A A G C T C G T A
p-value:1e-5
log p-value:-1.178e+01
Information Content per bp:1.910
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.6 +/- 21.7bp
Average Position of motif in Background60.7 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TRTATRGTGTGTG-----
--NNGCGTGTGTGCNGCN
 A C G T C T G A A C G T C G T A A G C T C T G A A C T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TRTATRGTGTGTG-----
--NNNNTTGTGTGCTTNN
 A C G T C T G A A C G T C G T A A G C T C T G A A C T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TRTATRGTGTGTG---
----NTGGGTGTGGCC
 A C G T C T G A A C G T C G T A A G C T C T G A A C T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

Klf1/MA0493.1/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TRTATRGTGTGTG---
-----TGGGTGTGGCN
 A C G T C T G A A C G T C G T A A G C T C T G A A C T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TRTATRGTGTGTG
---ATGGGGTGAT
 A C G T C T G A A C G T C G T A A G C T C T G A A C T G A C G T A C T G A C G T A C T G A C G T A C T G
A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

ZNF143/MA0088.2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TRTATRGTGTGTG
CAATGCATTGTGGGTA
 A C G T A C G T A C G T A C G T C T G A A C G T C G T A A G C T C T G A A C T G A C G T A C T G A C G T A C T G A C G T A C T G
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.53
Offset:-8
Orientation:reverse strand
Alignment:--------TRTATRGTGTGTG
NNNNNNCTTTTATAN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T C G T A A G C T C T G A A C T G A C G T A C T G A C G T A C T G A C G T A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.53
Offset:-8
Orientation:reverse strand
Alignment:--------TRTATRGTGTGTG
NNNNNNCTTTTATAN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T C G T A A G C T C T G A A C T G A C G T A C T G A C G T A C T G A C G T A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TRTATRGTGTGTG---
----GGGGGTGTGTCC
 A C G T C T G A A C G T C G T A A G C T C T G A A C T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TRTATRGTGTGTG
-------TGCGTG
 A C G T C T G A A C G T C G T A A G C T C T G A A C T G A C G T A C T G A C G T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G