Information for 5-GAATGAATGAATGAAT (Motif 12)

C T A G C G T A C G T A C G A T A C T G C G T A C G T A A C G T C T A G G T C A C T G A A G C T C T A G G C T A G T C A G C A T
Reverse Opposite:
C G T A A C G T C A G T A G T C C T G A A G C T A C G T A G T C C G T A A C G T A C G T T A G C C G T A A C G T A C G T A G T C
p-value:1e-7
log p-value:-1.690e+01
Information Content per bp:1.787
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.5 +/- 20.5bp
Average Position of motif in Background51.9 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GAATGAATGAATGAAT
ACTATGAATGAATGAT-
 A C G T C T A G C G T A C G T A C G A T A C T G C G T A C G T A A C G T C T A G G T C A C T G A A G C T C T A G G C T A G T C A G C A T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T

PH0172.1_Tlx2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAATGAATGAATGAAT-
TAATTAATTAATAACTA
 C T A G C G T A C G T A C G A T A C T G C G T A C G T A A C G T C T A G G T C A C T G A A G C T C T A G G C T A G T C A G C A T A C G T
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T

PH0019.1_Dbx2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAATGAATGAATGAAT
TTTAATTAATTAATTC--
 A C G T A C G T C T A G C G T A C G T A C G A T A C T G C G T A C G T A A C G T C T A G G T C A C T G A A G C T C T A G G C T A G T C A G C A T
A C G T C A G T G A C T G T C A C G T A G C A T G A C T C G T A C G T A C G A T C A G T C T G A C G T A A C G T G C A T G T A C A C G T A C G T

PH0146.1_Pou3f1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAATGAATGAATGAAT
AATTAATTAATTAATTC--
 A C G T A C G T A C G T C T A G C G T A C G T A C G A T A C T G C G T A C G T A A C G T C T A G G T C A C T G A A G C T C T A G G C T A G T C A G C A T
C T G A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T C G A T G T A C A C G T A C G T

Hoxd8/MA0910.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAATGAATGAATGAAT-
TAAATAATTAATGGCTA
 C T A G C G T A C G T A C G A T A C T G C G T A C G T A A C G T C T A G G T C A C T G A A G C T C T A G G C T A G T C A G C A T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0080.1_Hoxd8/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAATGAATGAATGAAT-
TAAATAATTAATGGCTA
 C T A G C G T A C G T A C G A T A C T G C G T A C G T A A C G T C T A G G T C A C T G A A G C T C T A G G C T A G T C A G C A T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0091.1_Lhx1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAATGAATGAATGAAT
CGAATTAATTAATAATG
 A C G T C T A G C G T A C G T A C G A T A C T G C G T A C G T A A C G T C T A G G T C A C T G A A G C T C T A G G C T A G T C A G C A T
T G A C T C A G C G T A C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C A T G C T A G C T A G A C T A C T G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAATGAATGAATGAAT
HNRAATCAAT--------
 A C G T A C G T C T A G C G T A C G T A C G A T A C T G C G T A C G T A A C G T C T A G G T C A C T G A A G C T C T A G G C T A G T C A G C A T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0149.1_Pou3f4/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAATGAATGAATGAAT
AATTAATTAATTAATTC--
 A C G T A C G T A C G T C T A G C G T A C G T A C G A T A C T G C G T A C G T A A C G T C T A G G T C A C T G A A G C T C T A G G C T A G T C A G C A T
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C A C G T A C G T

PH0070.1_Hoxc5/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAATGAATGAATGAAT
CGAATTAATTAATTACT
 A C G T C T A G C G T A C G T A C G A T A C T G C G T A C G T A A C G T C T A G G T C A C T G A A G C T C T A G G C T A G T C A G C A T
T A G C T A C G G T C A T C G A A G C T G A C T G T C A C G T A G C A T C A G T C T G A T C G A A G C T G C A T T G C A G A C T G C A T