Information for 5-AGCAGGGAGCCTT (Motif 11)

C T G A C T A G A T G C C G T A C A T G C T A G A C T G C T G A A T C G A G T C G T A C A G C T A C G T
Reverse Opposite:
C G T A C T G A A C T G A C T G A T G C A G C T A G T C G A T C G A T C A C G T A T C G A G T C A G C T
p-value:1e-7
log p-value:-1.730e+01
Information Content per bp:1.820
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif36.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets44.1 +/- 25.8bp
Average Position of motif in Background51.5 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AGCAGGGAGCCTT
----CGGAGC---
 C T G A C T A G A T G C C G T A C A T G C T A G A C T G C T G A A T C G A G T C G T A C A G C T A C G T
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGCAGGGAGCCTT
GRTGMTRGAGCC--
 A C G T C T G A C T A G A T G C C G T A C A T G C T A G A C T G C T G A A T C G A G T C G T A C A G C T A C G T
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGCAGGGAGCCTT
---AGCGCGCC--
 C T G A C T A G A T G C C G T A C A T G C T A G A C T G C T G A A T C G A G T C G T A C A G C T A C G T
A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGCAGGGAGCCTT
DCHCAGCAGGRGGCC--
 A C G T A C G T A C G T A C G T C T G A C T A G A T G C C G T A C A T G C T A G A C T G C T G A A T C G A G T C G T A C A G C T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGCAGGGAGCCTT
CACAGCAGGGGG----
 A C G T A C G T A C G T C T G A C T A G A T G C C G T A C A T G C T A G A C T G C T G A A T C G A G T C G T A C A G C T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGCAGGGAGCCTT-
--CAAGACGCCTTA
 C T G A C T A G A T G C C G T A C A T G C T A G A C T G C T G A A T C G A G T C G T A C A G C T A C G T A C G T
A C G T A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGCAGGGAGCCTT
CACAGCGGGGGGTC--
 A C G T A C G T A C G T C T G A C T A G A T G C C G T A C A T G C T A G A C T G C T G A A T C G A G T C G T A C A G C T A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGCAGGGAGCCTT--------
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T C T G A C T A G A T G C C G T A C A T G C T A G A C T G C T G A A T C G A G T C G T A C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:AGCAGGGAGCCTT
------CAGCC--
 C T G A C T A G A T G C C G T A C A T G C T A G A C T G C T G A A T C G A G T C G T A C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGCAGGGAGCCTT-----
-NNNNTGAGCACTGTNNG
 C T G A C T A G A T G C C G T A C A T G C T A G A C T G C T G A A T C G A G T C G T A C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G