Information for 4-GAMCTGACTAGCT (Motif 8)

A C T G G T C A G T A C T G A C A C G T C T A G T G C A T A G C A G C T G T C A A T C G A G T C G A C T
Reverse Opposite:
C T G A T C A G T A G C C A G T C T G A A T C G A C G T G A T C C G T A A C T G C A T G C A G T A G T C
p-value:1e-7
log p-value:-1.738e+01
Information Content per bp:1.622
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif11.22%
Number of Background Sequences with motif579.3
Percentage of Background Sequences with motif1.19%
Average Position of motif in Targets52.7 +/- 31.8bp
Average Position of motif in Background49.3 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAMCTGACTAGCT-
AGAAATGACTTCCCT
 A C G T A C T G G T C A G T A C T G A C A C G T C T A G T G C A T A G C A G C T G T C A A T C G A G T C G A C T A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAMCTGACTAGCT
TGACCTYA------
 A C G T A C T G G T C A G T A C T G A C A C G T C T A G T G C A T A G C A G C T G T C A A T C G A G T C G A C T
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GAMCTGACTAGCT
TGACCT--------
 A C G T A C T G G T C A G T A C T G A C A C G T C T A G T G C A T A G C A G C T G T C A A T C G A G T C G A C T
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0154.1_Prrx1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GAMCTGACTAGCT---
GTAACTAATTAACTACT
 A C G T A C T G G T C A G T A C T G A C A C G T C T A G T G C A T A G C A G C T G T C A A T C G A G T C G A C T A C G T A C G T A C G T
T A C G A C G T G T C A T C G A A G T C G A C T T C G A C T G A A G C T A G C T C T G A T C G A A G T C C A G T C T G A T A G C A G C T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GAMCTGACTAGCT
TGACCTARTT----
 A C G T A C T G G T C A G T A C T G A C A C G T C T A G T G C A T A G C A G C T G T C A A T C G A G T C G A C T
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GAMCTGACTAGCT
GTGACCTT-------
 A C G T A C G T A C T G G T C A G T A C T G A C A C G T C T A G T G C A T A G C A G C T G T C A A T C G A G T C G A C T
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GAMCTGACTAGCT
RGGGCACTAACY----
 A C G T A C G T A C G T A C T G G T C A G T A C T G A C A C G T C T A G T G C A T A G C A G C T G T C A A T C G A G T C G A C T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GAMCTGACTAGCT
--CATGAC-----
 A C T G G T C A G T A C T G A C A C G T C T A G T G C A T A G C A G C T G T C A A T C G A G T C G A C T
A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T

PH0028.1_En1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GAMCTGACTAGCT---
GNATTAATTAGTTNNC
 A C T G G T C A G T A C T G A C A C G T C T A G T G C A T A G C A G C T G T C A A T C G A G T C G A C T A C G T A C G T A C G T
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GAMCTGACTAGCT
TGACCTTGAT----
 A C G T A C T G G T C A G T A C T G A C A C G T C T A G T G C A T A G C A G C T G T C A A T C G A G T C G A C T
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T A C G T