Information for 9-ATAATTTTST (Motif 33)

C G T A A C G T C T G A C G T A A C G T A C G T A C G T A C G T A T C G A C G T
Reverse Opposite:
C G T A A T G C G T C A C G T A C G T A C G T A A C G T G A C T C G T A C G A T
p-value:1e-2
log p-value:-5.172e+00
Information Content per bp:1.829
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif423.6
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets80.6 +/- 17.2bp
Average Position of motif in Background47.8 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ATAATTTTST
AATAATT----
 A C G T C G T A A C G T C T G A C G T A A C G T A C G T A C G T A C G T A T C G A C G T
G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T A C G T

Dlx1/MA0879.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ATAATTTTST
NNTAATTANN-
 A C G T C G T A A C G T C T G A C G T A A C G T A C G T A C G T A C G T A T C G A C G T
T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G A C G T

PRRX1/MA0716.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATAATTTTST
NTAATTAN--
 C G T A A C G T C T G A C G T A A C G T A C G T A C G T A C G T A T C G A C G T
A G C T C G A T C T G A C T G A C A G T A G C T C T G A T C A G A C G T A C G T

Prrx2/MA0075.2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATAATTTTST
NTAATTGN--
 C G T A A C G T C T G A C G T A A C G T A C G T A C G T A C G T A T C G A C G T
A G C T C G A T C T G A C T G A A C G T A G C T C T A G T C A G A C G T A C G T

LMX1B/MA0703.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATAATTTTST
TTAATTAN--
 C G T A A C G T C T G A C G T A A C G T A C G T A C G T A C G T A T C G A C G T
A G C T C G A T G C T A G C T A C G A T G C A T C T G A T G C A A C G T A C G T

SHOX/MA0630.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATAATTTTST
TTAATTGG--
 C G T A A C G T C T G A C G T A A C G T A C G T A C G T A C G T A T C G A C G T
G A C T G C A T T C G A C T G A A C G T C G A T C T A G T C A G A C G T A C G T

Dlx3/MA0880.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATAATTTTST
NTAATTGN--
 C G T A A C G T C T G A C G T A A C G T A C G T A C G T A C G T A T C G A C G T
C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G A C G T A C G T

Dlx2/MA0885.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATAATTTTST
NTAATTGN--
 C G T A A C G T C T G A C G T A A C G T A C G T A C G T A C G T A T C G A C G T
C G A T G C A T T G C A C G T A C A G T C A G T C T A G A T G C A C G T A C G T

PH0143.1_Pou2f1/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----ATAATTTTST-
ATATATTAATTAAGTA
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C T G A C G T A A C G T A C G T A C G T A C G T A T C G A C G T A C G T
C T G A G A C T C T A G G C A T C T G A G C A T G C A T G T C A C G T A C G A T A C G T G C T A C T G A A C T G G C A T C G T A

RAX/MA0718.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATAATTTTST
NTTAATTGNN-
 A C G T C G T A A C G T C T G A C G T A A C G T A C G T A C G T A C G T A T C G A C G T
C T A G G A C T G C A T C G T A C G T A C A G T C G A T C T A G T C A G A G T C A C G T