Information for 7-ATCYMSCAAA (Motif 31)

G T C A A C G T G T A C G A T C G T A C A T G C A G T C C G T A C G T A C G T A
Reverse Opposite:
C G A T C G A T A C G T T C A G T A C G C A T G C T A G C A T G G T C A C A G T
p-value:1e-2
log p-value:-6.635e+00
Information Content per bp:1.656
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif1212.2
Percentage of Background Sequences with motif2.47%
Average Position of motif in Targets51.2 +/- 31.1bp
Average Position of motif in Background50.8 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1/MA0070.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATCYMSCAAA
CCATCAATCAAA
 A C G T A C G T G T C A A C G T G T A C G A T C G T A C A T G C A G T C C G T A C G T A C G T A
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATCYMSCAAA
GYCATCMATCAT-
 A C G T A C G T A C G T G T C A A C G T G T A C G A T C G T A C A T G C A G T C C G T A C G T A C G T A
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATCYMSCAAA-----
TCACCCATCAATAAACA
 A C G T A C G T G T C A A C G T G T A C G A T C G T A C A T G C A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

CEBPD/MA0836.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATCYMSCAAA
ATTGCGCAAT
 G T C A A C G T G T A C G A T C G T A C A T G C A G T C C G T A C G T A C G T A
T C G A A C G T A C G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T

CEBPG/MA0838.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATCYMSCAAA
ATTGCGCAAT
 G T C A A C G T G T A C G A T C G T A C A T G C A G T C C G T A C G T A C G T A
T C G A C A G T C A G T C T A G G A T C C T A G G A T C C T G A C G T A A G C T

CEBPB/MA0466.2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATCYMSCAAA
ATTGCGCAAT
 G T C A A C G T G T A C G A T C G T A C A T G C A G T C C G T A C G T A C G T A
T C G A G A C T C A G T C T A G G A T C T C A G G T A C T G C A G C T A A G C T

CEBPE/MA0837.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATCYMSCAAA
ATTGCGCAAT
 G T C A A C G T G T A C G A T C G T A C A T G C A G T C C G T A C G T A C G T A
T C G A G A C T C A G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATCYMSCAAA
TCATCAATCA--
 A C G T A C G T G T C A A C G T G T A C G A T C G T A C A T G C A G T C C G T A C G T A C G T A
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATCYMSCAAA--
TTATGTACTAATAA
 A C G T A C G T G T C A A C G T G T A C G A T C G T A C A T G C A G T C C G T A C G T A C G T A A C G T A C G T
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATCYMSCAAA
NATGTTGCAA-
 A C G T G T C A A C G T G T A C G A T C G T A C A T G C A G T C C G T A C G T A C G T A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T