Information for 4-ACAGGAGYTA (Motif 28)

C G T A A T G C C G T A C T A G T A C G C G T A A C T G A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A C T A G G T A C C G A T A T G C A G T C G C A T A T C G A C G T
p-value:1e-4
log p-value:-9.404e+00
Information Content per bp:1.751
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif380.5
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets58.0 +/- 27.5bp
Average Position of motif in Background51.8 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYF6/MA0667.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGAGYTA
AACAGCTGTT-
 A C G T C G T A A T G C C G T A C T A G T A C G C G T A A C T G A G T C A C G T C G T A
T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T A C G T

MSC/MA0665.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACAGGAGYTA
AACAGCTGTT-
 A C G T C G T A A T G C C G T A C T A G T A C G C G T A A C T G A G T C A C G T C G T A
C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T

Tcf21/MA0832.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACAGGAGYTA-
GCAACAGCTGTTGT
 A C G T A C G T A C G T C G T A A T G C C G T A C T A G T A C G C G T A A C T G A G T C A C G T C G T A A C G T
T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACAGGAGYTA
ACAGCTGTTV
 C G T A A T G C C G T A C T A G T A C G C G T A A C T G A G T C A C G T C G T A
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACAGGAGYTA--
--AGGTGTTAAT
 C G T A A T G C C G T A C T A G T A C G C G T A A C T G A G T C A C G T C G T A A C G T A C G T
A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

FIGLA/MA0820.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGAGYTA
AACAGGTGNT-
 A C G T C G T A A T G C C G T A C T A G T A C G C G T A A C T G A G T C A C G T C G T A
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACAGGAGYTA
TGACAGGTGTCA
 A C G T A C G T C G T A A T G C C G T A C T A G T A C G C G T A A C T G A G T C A C G T C G T A
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACAGGAGYTA--
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T C G T A A T G C C G T A C T A G T A C G C G T A A C T G A G T C A C G T C G T A A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGAGYTA
NNCAGGTGTN-
 A C G T C G T A A T G C C G T A C T A G T A C G C G T A A C T G A G T C A C G T C G T A
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ACAGGAGYTA--
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C G T C G T A A T G C C G T A C T A G T A C G C G T A A C T G A G T C A C G T C G T A A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G