Information for 11-AGGCACACRGTTG (Motif 20)

C T G A C T A G A C T G A G T C C G T A G T A C G C T A A G T C T C A G A C T G A C G T A C G T C A T G
Reverse Opposite:
G A T C C G T A G T C A T A G C A G T C C T A G C G A T A C T G G A C T A C T G A G T C A G T C A G C T
p-value:1e-7
log p-value:-1.776e+01
Information Content per bp:1.742
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif32.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets51.6 +/- 25.7bp
Average Position of motif in Background46.9 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGCACACRGTTG-
AGCGGCACACACGCAA
 A C G T A C G T C T G A C T A G A C T G A G T C C G T A G T A C G C T A A G T C T C A G A C T G A C G T A C G T C A T G A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGGCACACRGTTG-
CGAAGCACACAAAATA
 A C G T A C G T C T G A C T A G A C T G A G T C C G T A G T A C G C T A A G T C T C A G A C T G A C G T A C G T C A T G A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AGGCACACRGTTG
----TGTCGGTT-
 C T G A C T A G A C T G A G T C C G T A G T A C G C T A A G T C T C A G A C T G A C G T A C G T C A T G
A C G T A C G T A C G T A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGGCACACRGTTG
CCAGGAACAG-----
 A C G T A C G T C T G A C T A G A C T G A G T C C G T A G T A C G C T A A G T C T C A G A C T G A C G T A C G T C A T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------AGGCACACRGTTG
NNNNTTGGGCACNNCN---
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A C T G A G T C C G T A G T A C G C T A A G T C T C A G A C T G A C G T A C G T C A T G
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGGCACACRGTTG-
----BRRCVGTTDN
 C T G A C T A G A C T G A G T C C G T A G T A C G C T A A G T C T C A G A C T G A C G T A C G T C A T G A C G T
A C G T A C G T A C G T A C G T A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AGGCACACRGTTG
NGTGGGCAT-------
 A C G T A C G T A C G T C T G A C T A G A C T G A G T C C G T A G T A C G C T A A G T C T C A G A C T G A C G T A C G T C A T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGGCACACRGTTG
AAGGCAAGTGT---
 A C G T C T G A C T A G A C T G A G T C C G T A G T A C G C T A A G T C T C A G A C T G A C G T A C G T C A T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGGCACACRGTTG
AAGCACTTAA---
 C T G A C T A G A C T G A G T C C G T A G T A C G C T A A G T C T C A G A C T G A C G T A C G T C A T G
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AGGCACACRGTTG----
-GAAGAACAGGTGTCCG
 C T G A C T A G A C T G A G T C C G T A G T A C G C T A A G T C T C A G A C T G A C G T A C G T C A T G A C G T A C G T A C G T A C G T
A C G T T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G