Information for 7-TTKCAGRMWTTAA (Motif 13)

A C G T A C G T A C T G A T G C C G T A A C T G C T A G G T C A C G T A A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C G T A C G A T A C G T A G T C A G T C A C G T A T C G G T A C C G T A G T C A
p-value:1e-9
log p-value:-2.085e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 21.9bp
Average Position of motif in Background46.4 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0124.1_Obox5_1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTKCAGRMWTTAA-----
-TAGAGGGATTAAATTTC
 A C G T A C G T A C T G A T G C C G T A A C T G C T A G G T C A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

Hmx1/MA0896.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTKCAGRMWTTAA-----
-ACAAGCAATTAATGAAT
 A C G T A C G T A C T G A T G C C G T A A C T G C T A G G T C A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTKCAGRMWTTAA-----
-ACAAGCAATTAATGAAT
 A C G T A C G T A C T G A T G C C G T A A C T G C T A G G T C A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTKCAGRMWTTAA----
-ACCGGCAATTAATAAA
 A C G T A C G T A C T G A T G C C G T A A C T G C T A G G T C A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

PH0130.1_Otx2/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTKCAGRMWTTAA-----
-TGTAGGGATTAATTGTC
 A C G T A C G T A C T G A T G C C G T A A C T G C T A G G T C A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PH0137.1_Pitx1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTKCAGRMWTTAA----
TTAGAGGGATTAACAAT
 A C G T A C G T A C T G A T G C C G T A A C T G C T A G G T C A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0062.1_Hoxb7/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTKCAGRMWTTAA---
TNNCATTAATTANTNC
 A C G T A C G T A C T G A T G C C G T A A C T G C T A G G T C A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T
A G C T C G A T T A C G G T A C T G C A A C G T G A C T G T C A G C T A C G A T C A G T C T G A T G A C A C G T T C G A T A G C

PH0073.1_Hoxc9/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTKCAGRMWTTAA----
-GGAGGTCATTAATTAT
 A C G T A C G T A C T G A T G C C G T A A C T G C T A G G T C A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTKCAGRMWTTAA-----
-NANAGGGATTAATTATN
 A C G T A C G T A C T G A T G C C G T A A C T G C T A G G T C A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

BCL6B/MA0731.1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TTKCAGRMWTTAA
TGCTTTCTAGGAATTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C C G T A A C T G C T A G G T C A C G T A A C G T A C G T C G T A C G T A
A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A