Information for 4-CGCCCCGAGGCAC (Motif 6)

A T G C A C T G A G T C A G T C A T G C A T G C A C T G C G T A A T C G A C T G A G T C G T C A A T G C
Reverse Opposite:
A T C G C A G T A C T G A G T C A T G C C G A T A G T C A T C G T A C G C T A G C T A G A G T C T A C G
p-value:1e-11
log p-value:-2.542e+01
Information Content per bp:1.795
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif54.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets43.1 +/- 24.0bp
Average Position of motif in Background49.8 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CGCCCCGAGGCAC
TGCCCCCGGGCA-
A T G C A C T G A G T C A G T C A T G C A T G C A C T G C G T A A T C G A C T G A G T C G T C A A T G C
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CGCCCCGAGGCAC
TGCCCCAGGGCA-
A T G C A C T G A G T C A G T C A T G C A T G C A C T G C G T A A T C G A C T G A G T C G T C A A T G C
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CGCCCCGAGGCAC
TGCCCCAGGGCA-
A T G C A C T G A G T C A G T C A T G C A T G C A C T G C G T A A T C G A C T G A G T C G T C A A T G C
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CGCCCCGAGGCAC
TTGCCCTAGGGCAT
A C G T A T G C A C T G A G T C A G T C A T G C A T G C A C T G C G T A A T C G A C T G A G T C G T C A A T G C
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGCCCCGAGGCAC
ATGCCCTGAGGC--
A C G T A T G C A C T G A G T C A G T C A T G C A T G C A C T G C G T A A T C G A C T G A G T C G T C A A T G C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGCCCCGAGGCAC
WTGSCCTSAGGS--
A C G T A T G C A C T G A G T C A G T C A T G C A T G C A C T G C G T A A T C G A C T G A G T C G T C A A T G C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGCCCCGAGGCAC
CCGCCCAAGGGCAG
A C G T A T G C A C T G A G T C A G T C A T G C A T G C A C T G C G T A A T C G A C T G A G T C G T C A A T G C
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

PB0147.1_Max_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGCCCCGAGGCAC
NNGTCGCGTGNCAC
A C G T A T G C A C T G A G T C A G T C A T G C A T G C A C T G C G T A A T C G A C T G A G T C G T C A A T G C
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGCCCCGAGGCAC
CGCCCCCTGACA-
A T G C A C T G A G T C A G T C A T G C A T G C A C T G C G T A A T C G A C T G A G T C G T C A A T G C
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGCCCCGAGGCAC
NTGCCCANNGGTNA
A C G T A T G C A C T G A G T C A G T C A T G C A T G C A C T G C G T A A T C G A C T G A G T C G T C A A T G C
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A