Information for 12-AAGCTTGGTT (Motif 22)

C G T A C G T A A T C G A G T C A G C T A C G T C T A G A T C G A C G T A C G T
Reverse Opposite:
C G T A C G T A A T G C A G T C C G T A C T G A A C T G A T G C A C G T A C G T
p-value:1e-8
log p-value:-1.884e+01
Information Content per bp:1.887
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif19.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets58.1 +/- 22.3bp
Average Position of motif in Background45.9 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:AAGCTTGGTT
AAGCTTG---
 C G T A C G T A A T C G A G T C A G C T A C G T C T A G A T C G A C G T A C G T
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAGCTTGGTT--
--YCTTTGTTCC
 C G T A C G T A A T C G A G T C A G C T A C G T C T A G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0159.1_Rfx4_2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGCTTGGTT-----
TACCCTAGTTACCGA
 C G T A C G T A A T C G A G T C A G C T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAGCTTGGTT--
--CCTTTGTTTT
 C G T A C G T A A T C G A G T C A G C T A C G T C T A G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AAGCTTGGTT-----
NNNTCCTTTGTTCTNNN
 A C G T A C G T C G T A C G T A A T C G A G T C A G C T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAGCTTGGTT-----
TNNTCCTTTGTTCTNNT
 A C G T A C G T C G T A C G T A A T C G A G T C A G C T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

HMBOX1/MA0895.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AAGCTTGGTT---
---ACTAGTTAAC
 C G T A C G T A A T C G A G T C A G C T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAGCTTGGTT--
--CCWTTGTYYB
 C G T A C G T A A T C G A G T C A G C T A C G T C T A G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------AAGCTTGGTT-
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T C G A G T C A G C T A C G T C T A G A T C G A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AAGCTTGGTT
--CCTTTGTT
 C G T A C G T A A T C G A G T C A G C T A C G T C T A G A T C G A C G T A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T