Information for 1-GGGARTTGTAGTC (Motif 1)

A C T G A C T G A C T G T C G A T C G A C G A T A G C T C T A G A C G T C T G A A C T G A C G T A G T C
Reverse Opposite:
T C A G G T C A A G T C A G C T G T C A A G T C C T G A C G T A A G C T A C G T A G T C A G T C A G T C
p-value:1e-14
log p-value:-3.429e+01
Information Content per bp:1.794
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif134.3
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets52.2 +/- 20.9bp
Average Position of motif in Background44.1 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:GGGARTTGTAGTC
GGGAATTGTAGT-
 A C T G A C T G A C T G T C G A T C G A C G A T A G C T C T A G A C G T C T G A A C T G A C G T A G T C
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.87
Offset:-7
Orientation:reverse strand
Alignment:-------GGGARTTGTAGTC
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G T C G A T C G A C G A T A G C T C T A G A C G T C T G A A C T G A C G T A G T C
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.83
Offset:-7
Orientation:reverse strand
Alignment:-------GGGARTTGTAGTC
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G T C G A T C G A C G A T A G C T C T A G A C G T C T G A A C T G A C G T A G T C
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGGARTTGTAGTC
TGGGGA---------
 A C G T A C G T A C T G A C T G A C T G T C G A T C G A C G A T A G C T C T A G A C G T C T G A A C T G A C G T A G T C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGGARTTGTAGTC---
GNNATTTGTCGTAANN
 A C T G A C T G A C T G T C G A T C G A C G A T A G C T C T A G A C G T C T G A A C T G A C G T A G T C A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGGARTTGTAGTC--
---NNHTGTGGTTWN
 A C T G A C T G A C T G T C G A T C G A C G A T A G C T C T A G A C G T C T G A A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PH0130.1_Otx2/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GGGARTTGTAGTC
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G T C G A T C G A C G A T A G C T C T A G A C G T C T G A A C T G A C G T A G T C
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GGGARTTGTAGTC--
-----CTGTGGTTTN
 A C T G A C T G A C T G T C G A T C G A C G A T A G C T C T A G A C G T C T G A A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

PH0138.1_Pitx2/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GGGARTTGTAGTC
TGAAGGGATTAATCATC
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G T C G A T C G A C G A T A G C T C T A G A C G T C T G A A C T G A C G T A G T C
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GGGARTTGTAGTC
TGGAACAGMA---
 A C T G A C T G A C T G T C G A T C G A C G A T A G C T C T A G A C G T C T G A A C T G A C G T A G T C
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T