Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-20 | -4.722e+01 | 0.0000 | 33.0 | 3.59% | 184.9 | 0.39% | motif file (matrix) |
svg |
2 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-12 | -2.834e+01 | 0.0000 | 107.0 | 11.64% | 2625.0 | 5.50% | motif file (matrix) |
svg |
3 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-12 | -2.783e+01 | 0.0000 | 107.0 | 11.64% | 2646.2 | 5.54% | motif file (matrix) |
svg |
4 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-11 | -2.589e+01 | 0.0000 | 119.0 | 12.95% | 3181.3 | 6.66% | motif file (matrix) |
svg |
5 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-10 | -2.346e+01 | 0.0000 | 119.0 | 12.95% | 3309.5 | 6.93% | motif file (matrix) |
svg |
6 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-10 | -2.306e+01 | 0.0000 | 111.0 | 12.08% | 3024.2 | 6.33% | motif file (matrix) |
svg |
7 |
| Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-10 | -2.305e+01 | 0.0000 | 77.0 | 8.38% | 1785.6 | 3.74% | motif file (matrix) |
svg |
8 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-9 | -2.193e+01 | 0.0000 | 73.0 | 7.94% | 1691.0 | 3.54% | motif file (matrix) |
svg |
9 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-9 | -2.191e+01 | 0.0000 | 150.0 | 16.32% | 4640.8 | 9.72% | motif file (matrix) |
svg |
10 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-9 | -2.178e+01 | 0.0000 | 123.0 | 13.38% | 3561.9 | 7.46% | motif file (matrix) |
svg |
11 |
| MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-8 | -1.940e+01 | 0.0000 | 92.0 | 10.01% | 2496.9 | 5.23% | motif file (matrix) |
svg |
12 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-7 | -1.694e+01 | 0.0000 | 103.0 | 11.21% | 3066.1 | 6.42% | motif file (matrix) |
svg |
13 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-6 | -1.542e+01 | 0.0000 | 45.0 | 4.90% | 989.2 | 2.07% | motif file (matrix) |
svg |
14 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-6 | -1.439e+01 | 0.0000 | 8.0 | 0.87% | 35.2 | 0.07% | motif file (matrix) |
svg |
15 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-6 | -1.390e+01 | 0.0000 | 71.0 | 7.73% | 1998.3 | 4.19% | motif file (matrix) |
svg |
16 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-5 | -1.244e+01 | 0.0001 | 196.0 | 21.33% | 7492.9 | 15.69% | motif file (matrix) |
svg |
17 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-5 | -1.242e+01 | 0.0001 | 43.0 | 4.68% | 1039.3 | 2.18% | motif file (matrix) |
svg |
18 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-5 | -1.152e+01 | 0.0002 | 24.0 | 2.61% | 445.3 | 0.93% | motif file (matrix) |
svg |
19 |
| RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer | 1e-4 | -1.100e+01 | 0.0003 | 41.0 | 4.46% | 1031.2 | 2.16% | motif file (matrix) |
svg |
20 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-4 | -1.061e+01 | 0.0004 | 127.0 | 13.82% | 4587.0 | 9.61% | motif file (matrix) |
svg |
21 |
| RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer | 1e-4 | -9.896e+00 | 0.0009 | 41.0 | 4.46% | 1084.6 | 2.27% | motif file (matrix) |
svg |
22 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-4 | -9.549e+00 | 0.0012 | 104.0 | 11.32% | 3685.3 | 7.72% | motif file (matrix) |
svg |
23 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-3 | -9.061e+00 | 0.0018 | 12.0 | 1.31% | 165.4 | 0.35% | motif file (matrix) |
svg |
24 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-3 | -8.867e+00 | 0.0021 | 303.0 | 32.97% | 13118.6 | 27.48% | motif file (matrix) |
svg |
25 |
| RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -8.722e+00 | 0.0024 | 37.0 | 4.03% | 996.5 | 2.09% | motif file (matrix) |
svg |
26 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-3 | -8.703e+00 | 0.0024 | 43.0 | 4.68% | 1225.0 | 2.57% | motif file (matrix) |
svg |
27 |
| RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer | 1e-3 | -8.561e+00 | 0.0026 | 50.0 | 5.44% | 1506.5 | 3.16% | motif file (matrix) |
svg |
28 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -8.525e+00 | 0.0026 | 16.0 | 1.74% | 287.0 | 0.60% | motif file (matrix) |
svg |
29 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-3 | -8.484e+00 | 0.0026 | 78.0 | 8.49% | 2666.7 | 5.59% | motif file (matrix) |
svg |
30 |
| SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer | 1e-3 | -8.037e+00 | 0.0039 | 19.0 | 2.07% | 394.0 | 0.83% | motif file (matrix) |
svg |
31 |
| ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer | 1e-3 | -7.402e+00 | 0.0072 | 8.0 | 0.87% | 96.0 | 0.20% | motif file (matrix) |
svg |
32 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-3 | -7.248e+00 | 0.0081 | 146.0 | 15.89% | 5854.0 | 12.26% | motif file (matrix) |
svg |
33 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.746e+00 | 0.0130 | 71.0 | 7.73% | 2529.3 | 5.30% | motif file (matrix) |
svg |
34 |
| Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.694e+00 | 0.0133 | 18.0 | 1.96% | 408.5 | 0.86% | motif file (matrix) |
svg |
35 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-2 | -5.980e+00 | 0.0263 | 84.0 | 9.14% | 3187.5 | 6.68% | motif file (matrix) |
svg |
36 |
| ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.847e+00 | 0.0292 | 8.0 | 0.87% | 122.6 | 0.26% | motif file (matrix) |
svg |
37 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.839e+00 | 0.0292 | 106.0 | 11.53% | 4205.9 | 8.81% | motif file (matrix) |
svg |
38 |
| Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer | 1e-2 | -5.774e+00 | 0.0298 | 29.0 | 3.16% | 858.7 | 1.80% | motif file (matrix) |
svg |
39 |
| YY1(Zf)/Promoter/Homer | 1e-2 | -5.720e+00 | 0.0306 | 12.0 | 1.31% | 244.7 | 0.51% | motif file (matrix) |
svg |
40 |
| IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer | 1e-2 | -5.670e+00 | 0.0314 | 11.0 | 1.20% | 214.9 | 0.45% | motif file (matrix) |
svg |
41 |
| ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer | 1e-2 | -5.648e+00 | 0.0314 | 10.0 | 1.09% | 184.4 | 0.39% | motif file (matrix) |
svg |
42 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -5.644e+00 | 0.0314 | 90.0 | 9.79% | 3500.5 | 7.33% | motif file (matrix) |
svg |
43 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-2 | -5.408e+00 | 0.0379 | 12.0 | 1.31% | 254.3 | 0.53% | motif file (matrix) |
svg |
44 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.389e+00 | 0.0379 | 3.0 | 0.33% | 17.9 | 0.04% | motif file (matrix) |
svg |
45 |
| Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -5.353e+00 | 0.0383 | 17.0 | 1.85% | 428.6 | 0.90% | motif file (matrix) |
svg |
46 |
| Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer | 1e-2 | -5.329e+00 | 0.0384 | 48.0 | 5.22% | 1675.4 | 3.51% | motif file (matrix) |
svg |
47 |
| IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer | 1e-2 | -5.228e+00 | 0.0415 | 9.0 | 0.98% | 166.0 | 0.35% | motif file (matrix) |
svg |
48 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.103e+00 | 0.0461 | 86.0 | 9.36% | 3390.1 | 7.10% | motif file (matrix) |
svg |
49 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.094e+00 | 0.0461 | 57.0 | 6.20% | 2089.0 | 4.38% | motif file (matrix) |
svg |
50 |
| HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer | 1e-2 | -4.906e+00 | 0.0539 | 6.0 | 0.65% | 87.5 | 0.18% | motif file (matrix) |
svg |
51 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-2 | -4.820e+00 | 0.0576 | 34.0 | 3.70% | 1128.7 | 2.36% | motif file (matrix) |
svg |