Information for 3-GACCACAAAC (Motif 5)

A T C G T G C A T A G C A G T C C G T A A G T C C T G A G C T A C T G A A G T C
Reverse Opposite:
A C T G A G C T C G A T A G C T A C T G A C G T A C T G A T C G A C G T A T G C
p-value:1e-10
log p-value:-2.478e+01
Information Content per bp:1.820
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif83.1
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets51.6 +/- 24.8bp
Average Position of motif in Background52.5 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--GACCACAAAC
NWAACCACADNN
 A C G T A C G T A T C G T G C A T A G C A G T C C G T A A G T C C T G A G C T A C T G A A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GACCACAAAC
AAACCACAGAN
 A C G T A T C G T G C A T A G C A G T C C G T A A G T C C T G A G C T A C T G A A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GACCACAAAC
NAAACCACAG--
 A C G T A C G T A T C G T G C A T A G C A G T C C G T A A G T C C T G A G C T A C T G A A G T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GACCACAAAC
AAACCACAGC-
 A C G T A T C G T G C A T A G C A G T C C G T A A G T C C T G A G C T A C T G A A G T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GACCACAAAC
AAACCGCAAA-
 A C G T A T C G T G C A T A G C A G T C C G T A A G T C C T G A G C T A C T G A A G T C
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GACCACAAAC
AAACCACANN-
 A C G T A T C G T G C A T A G C A G T C C G T A A G T C C T G A G C T A C T G A A G T C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GACCACAAAC-
GGACCACCCACG
 A C G T A T C G T G C A T A G C A G T C C G T A A G T C C T G A G C T A C T G A A G T C A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GACCACAAAC----
AGCGGCACACACGCAA
 A C G T A C G T A T C G T G C A T A G C A G T C C G T A A G T C C T G A G C T A C T G A A G T C A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GACCACAAAC-
RGGGCACTAACY
 A C G T A T C G T G C A T A G C A G T C C G T A A G T C C T G A G C T A C T G A A G T C A C G T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

ZBTB7A/MA0750.1/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GACCACAAAC
GGCGACCACCGA-
 A C G T A C G T A C G T A T C G T G C A T A G C A G T C C G T A A G T C C T G A G C T A C T G A A G T C
A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A A C G T