Information for 1-CTATTTTTAGTTC (Motif 3)

A T G C C G A T G C T A C G A T A C G T A C G T A C G T A C G T C G T A T A C G A G C T A C G T T G A C
Reverse Opposite:
A C T G C G T A C T G A A G T C C G A T C G T A C G T A C G T A C G T A C G T A C G A T C G T A A T C G
p-value:1e-12
log p-value:-2.784e+01
Information Content per bp:1.795
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.2 +/- 26.1bp
Average Position of motif in Background51.5 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--CTATTTTTAGTTC
TTCTATTTTTAGNNN
 A C G T A C G T A T G C C G A T G C T A C G A T A C G T A C G T A C G T A C G T C G T A T A C G A G C T A C G T T G A C
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

MEF2D/MA0773.1/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTTTAGTTC
TCTATTTATAGN--
 A C G T A T G C C G A T G C T A C G A T A C G T A C G T A C G T A C G T C G T A T A C G A G C T A C G T T G A C
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:3
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTTTAGTTC
GCTATTTATAGC--
 A C G T A T G C C G A T G C T A C G A T A C G T A C G T A C G T A C G T C G T A T A C G A G C T A C G T T G A C
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:4
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTTTAGTTC
TCTATTTTTAGA--
 A C G T A T G C C G A T G C T A C G A T A C G T A C G T A C G T A C G T C G T A T A C G A G C T A C G T T G A C
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTTTAGTTC
KCTATTTTTRGH--
 A C G T A T G C C G A T G C T A C G A T A C G T A C G T A C G T A C G T C G T A T A C G A G C T A C G T T G A C
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CTATTTTTAGTTC
GCTATTTTTAGC--
 A C G T A T G C C G A T G C T A C G A T A C G T A C G T A C G T A C G T C G T A T A C G A G C T A C G T T G A C
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CTATTTTTAGTTC
CTATTTTTGG---
 A T G C C G A T G C T A C G A T A C G T A C G T A C G T A C G T C G T A T A C G A G C T A C G T T G A C
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CTATTTTTAGTTC
GCTATTTTTGGM--
 A C G T A T G C C G A T G C T A C G A T A C G T A C G T A C G T A C G T C G T A T A C G A G C T A C G T T G A C
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTATTTTTAGTTC--
NTNTTGTTGTTTGTN
 A T G C C G A T G C T A C G A T A C G T A C G T A C G T A C G T C G T A T A C G A G C T A C G T T G A C A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

MF0008.1_MADS_class/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTATTTTTAGTTC
CCATATATGG---
 A T G C C G A T G C T A C G A T A C G T A C G T A C G T A C G T C G T A T A C G A G C T A C G T T G A C
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T A C G T A C G T