Information for 7-AGCTCTCAAAGCG (Motif 19)

C G T A A C T G A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A G T C A C G T
p-value:1e-7
log p-value:-1.624e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 30.8bp
Average Position of motif in Background50.1 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0170.1_Tgif2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AGCTCTCAAAGCG
AACTAGCTGTCAATAC-
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C A C G T

PH0102.1_Meis1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AGCTCTCAAAGCG
AACGAGCTGTCAATAC-
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGCTCTCAAAGCG
AAAGACCTGTCAATCC-
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C A C G T

PH0104.1_Meis2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGCTCTCAAAGCG
AAAGACCTGTCAATAC-
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C A C G T

PH0105.1_Meis3/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGCTCTCAAAGCG
AATTACCTGTCAATAC-
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGCTCTCAAAGCG
AGCCACTCAAG---
 A C G T C G T A A C T G A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGCTCTCAAAGCG
AASCACTCAA----
 A C G T C G T A A C T G A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AGCTCTCAAAGCG
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGCTCTCAAAGCG
NSCACTYVAV---
 C G T A A C T G A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGCTCTCAAAGCG
RSCACTYRAG---
 C G T A A C T G A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T