| p-value: | 1e-9 |
| log p-value: | -2.072e+01 |
| Information Content per bp: | 1.766 |
| Number of Target Sequences with motif | 31.0 |
| Percentage of Target Sequences with motif | 3.37% |
| Number of Background Sequences with motif | 432.8 |
| Percentage of Background Sequences with motif | 0.91% |
| Average Position of motif in Targets | 48.0 +/- 27.0bp |
| Average Position of motif in Background | 49.7 +/- 27.8bp |
| Strand Bias (log2 ratio + to - strand density) | 0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.03 |
| Motif File: | file (matrix)
reverse opposite |
| SVG Files for Logos: | forward logo
reverse opposite |
GCM1/MA0646.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.77
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --ACCCGCAGGG
GTACCCGCATN- |
|
|
|
PB0024.1_Gcm1_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.75
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----ACCCGCAGGG--
TCGTACCCGCATCATT |
|
|
|
GCM2/MA0767.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.75
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -ACCCGCAGGG
TACCCGCATN- |
|
|
|
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
| Match Rank: | 4 |
| Score: | 0.63
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -ACCCGCAGGG----
DCHCAGCAGGRGGCC |
|
|
|
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 5 |
| Score: | 0.63
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | ACCCGCAGGG--
CACAGCAGGGGG |
|
|
|
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer
| Match Rank: | 6 |
| Score: | 0.62
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----ACCCGCAGGG
SNGCACCTGCHS-- |
|
|
|
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
| Match Rank: | 7 |
| Score: | 0.62
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -ACCCGCAGGG
DCTCAGCAGG- |
|
|
|
PB0085.1_Tcfap2a_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.61
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --ACCCGCAGGG---
NTCCCCTCAGGGANT |
|
|
|
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 9 |
| Score: | 0.61
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | ACCCGCAGGG---
-GCCTCAGGGCAT |
|
|
|
RUNX2/MA0511.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.60
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -ACCCGCAGGG
AAACCGCAA-- |
|
|
|
