Information for 5-SCCCGMTSGCYCTCGA (Motif 12)

A T C G A G T C A G T C T G A C A C T G G T A C A C G T A T G C A C T G G T A C A G T C A G T C A G C T A G T C A C T G G T C A
Reverse Opposite:
C A G T A G T C A C T G C T G A C T A G C T A G A C T G G T A C A T C G T G C A A C T G A G T C A C T G A C T G A C T G A T G C
p-value:1e-10
log p-value:-2.375e+01
Information Content per bp:1.809
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.2 +/- 21.5bp
Average Position of motif in Background69.4 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:SCCCGMTSGCYCTCGA
----GCTCGGSCTC--
 A T C G A G T C A G T C T G A C A C T G G T A C A C G T A T G C A C T G G T A C A G T C A G T C A G C T A G T C A C T G G T C A
A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:SCCCGMTSGCYCTCGA
CCCCCTTGGGCCCC--
 A T C G A G T C A G T C T G A C A C T G G T A C A C G T A T G C A C T G G T A C A G T C A G T C A G C T A G T C A C T G G T C A
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:3
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-SCCCGMTSGCYCTCGA
TGCCCCCGGGCA-----
 A C G T A T C G A G T C A G T C T G A C A C T G G T A C A C G T A T G C A C T G G T A C A G T C A G T C A G C T A G T C A C T G G T C A
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-SCCCGMTSGCYCTCGA
TGCCTGCGYCMCCTT--
 A C G T A T C G A G T C A G T C T G A C A C T G G T A C A C G T A T G C A C T G G T A C A G T C A G T C A G C T A G T C A C T G G T C A
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-SCCCGMTSGCYCTCGA
TGCCCCAGGGCA-----
 A C G T A T C G A G T C A G T C T G A C A C T G G T A C A C G T A T G C A C T G G T A C A G T C A G T C A G C T A G T C A C T G G T C A
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.49
Offset:5
Orientation:forward strand
Alignment:SCCCGMTSGCYCTCGA----
-----ACCACTCTCGGTCAC
 A T C G A G T C A G T C T G A C A C T G G T A C A C G T A T G C A C T G G T A C A G T C A G T C A G C T A G T C A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-SCCCGMTSGCYCTCGA
TGCCCCAGGGCA-----
 A C G T A T C G A G T C A G T C T G A C A C T G G T A C A C G T A T G C A C T G G T A C A G T C A G T C A G C T A G T C A C T G G T C A
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:SCCCGMTSGCYCTCGA----
-----NNAATTCTCGNTNAN
 A T C G A G T C A G T C T G A C A C T G G T A C A C G T A T G C A C T G G T A C A G T C A G T C A G C T A G T C A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:SCCCGMTSGCYCTCGA-
-------NSCACTYVAV
 A T C G A G T C A G T C T G A C A C T G G T A C A C G T A T G C A C T G G T A C A G T C A G T C A G C T A G T C A C T G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:SCCCGMTSGCYCTCGA
AACAGATGGC------
 A T C G A G T C A G T C T G A C A C T G G T A C A C G T A T G C A C T G G T A C A G T C A G T C A G C T A G T C A C T G G T C A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T